ProPred: prediction of HLA-DR binding sites.

Singh, H and Raghava, G.P.S. (2001) ProPred: prediction of HLA-DR binding sites. Bioinformatics (Oxford, England), 17 (12). pp. 1236-7. ISSN 1367-4803

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Abstract

ProPred is a graphical web tool for predicting MHC class II binding regions in antigenic protein sequences. The server implement matrix based prediction algorithm, employing amino-acid/position coefficient table deduced from literature. The predicted binders can be visualized either as peaks in graphical interface or as colored residues in HTML interface. This server might be a useful tool in locating the promiscuous binding regions that can bind to several HLA-DR alleles. AVAILABILITY: The server is available at http://www.imtech.res.in/raghava/propred/ CONTACT: raghava@imtech.res.in SUPPLEMENTARY INFORMATION: http://www.imtech.res.in/raghava/propred/page3.html

Item Type:	Article
Additional Information:	Copyright of this article belongs to Oxford University Press
Subjects:	Q Science > QR Microbiology
Depositing User:	Dr. K.P.S.Sengar
Date Deposited:	09 Jan 2012 09:45
Last Modified:	09 Jan 2012 09:45
URI:	http://crdd.osdd.net/open/id/eprint/105

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