creators_name: Singh, H
creators_name: Raghava, G.P.S.
type: article
datestamp: 2012-01-09 09:45:17
lastmod: 2012-01-09 09:45:17
metadata_visibility: show
title: ProPred: prediction of HLA-DR binding sites.
ispublished: pub
subjects: QR
full_text_status: restricted
note: Copyright of this article belongs to Oxford University Press
abstract: ProPred is a graphical web tool for predicting MHC class II binding regions in antigenic protein sequences. The server implement matrix based prediction algorithm, employing amino-acid/position coefficient table deduced from literature. The predicted binders can be visualized either as peaks in graphical interface or as colored residues in HTML interface. This server might be a useful tool in locating the promiscuous binding regions that can bind to several HLA-DR alleles. AVAILABILITY: The server is available at http://www.imtech.res.in/raghava/propred/ CONTACT: raghava@imtech.res.in SUPPLEMENTARY INFORMATION: http://www.imtech.res.in/raghava/propred/page3.html
date: 2001-12
date_type: published
publication: Bioinformatics (Oxford, England)
volume: 17
number: 12
publisher: Oxford University Press
pagerange: 1236-7
refereed: TRUE
issn: 1367-4803
official_url: http://bioinformatics.oxfordjournals.org/content/17/12/1236.long
related_url_url: http://www.imtech.res.in/raghava/proped
related_url_type: pub
citation:   Singh, H and Raghava, G.P.S.  (2001) ProPred: prediction of HLA-DR binding sites.  Bioinformatics (Oxford, England), 17 (12).  pp. 1236-7.  ISSN 1367-4803     
document_url: http://crdd.osdd.net/open/105/1/raghava2001.pdf