creators_name: Khatri, Indu
creators_name: Subramanian, Srikrishna
creators_name: Mayilraj, Shanmugam
type: article
datestamp: 2014-05-29 09:13:00
lastmod: 2014-05-29 09:13:00
metadata_visibility: show
title: Genome sequencing and annotation of Amycolatopsis azurea {DSM} 43854T 
ispublished: pub
subjects: QR
keywords: mycolatopsis azurea strain DSM 43854T; Illumina-HiSeq; NGS QC tool kit;Rapid Annotations using Subsystems Technology (RAST) 
note: OPEN ACCESS
abstract: We report the 9.2 Mb genome of the azureomycin A and B antibiotic producing strain Amycolatopsis azurea isolated from a Japanese soil sample. The draft genome of strain DSM 43854T consists of 9,223,451 bp with a G + C content of 69.0% and the genome contains 3 rRNA genes (5S–23S–16S) and 58 aminoacyl-tRNA synthetase genes. The homology searches revealed that the PKS gene clusters are supposed to be responsible for the biosynthesis of naptomycin, macbecin, rifamycin, mitomycin, maduropeptin enediyne, neocarzinostatin enediyne, C-1027 enediyne, calicheamicin enediyne, landomycin, simocyclinone, medermycin, granaticin, polyketomycin, teicoplanin, balhimycin, vancomycin, staurosporine, rubradirin and complestatin.
date: 2014
date_type: published
publication: Genomics Data 
volume: 2
publisher: Elsevier Science
pagerange: 44 - 45
refereed: TRUE
official_url: http://www.sciencedirect.com/science/article/pii/S221359601400004X
citation:   Khatri, Indu and Subramanian, Srikrishna and Mayilraj, Shanmugam  (2014) Genome sequencing and annotation of Amycolatopsis azurea {DSM} 43854T.  Genomics Data , 2.  44 - 45.      
document_url: http://crdd.osdd.net/open/1502/1/mayil2014.pdf