@article{open2175,
          volume = {19},
          number = {Suppl },
           month = {February},
          author = {Piyush Agrawal and Harinder Singh and Hemant Kumar Srivastava and Sandeep Singh and Gaurav Kishore and G.P.S. Raghava},
            note = {Open Access},
           title = {Benchmarking of different molecular docking methods for protein-peptide docking.},
       publisher = {Springer Nature},
            year = {2019},
         journal = {BMC bioinformatics},
           pages = {426},
        keywords = {ATTRACT; Benchmark; CAPRI; FRODOCK; Hex; PatchDock; Protein-peptide docking; ZDOCK; pepATTRACT},
             url = {http://crdd.osdd.net/open/2175/},
        abstract = {Molecular docking studies on protein-peptide interactions are a challenging and time-consuming task because peptides are generally more flexible than proteins and tend to adopt numerous conformations. There are several benchmarking studies on protein-protein, protein-ligand and nucleic acid-ligand docking interactions. However, a series of docking methods is not rigorously validated for protein-peptide complexes in the literature. Considering the importance and wide application of peptide docking, we describe benchmarking of 6 docking methods on 133 protein-peptide complexes having peptide length between 9 to 15 residues. The performance of docking methods was evaluated using CAPRI parameters like FNAT, I-RMSD, L-RMSD.}
}