<> "The repository administrator has not yet configured an RDF license."^^ . <> . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy."^^ . "The OXBench suite of reference alignments, evaluation software and results database provide a convenient method to assess progress in sequence alignment techniques. Evaluation measures that were dependent on comparison to a reference alignment were found to give good discrimination between methods. The STAMP Sc Score which is independent of a reference alignment also gave good discrimination. Application of OXBench in this paper shows that with the exception of T-COFFEE, the majority of the improvement in alignment accuracy seen since 1985 stems from improved pair-score matrices rather than algorithmic refinements. The maximum theoretical alignment accuracy obtained by pooling results over all methods was 94.5% with 52.5% accuracy for alignments in the 0-10 percentage identity range. This suggests that further improvements in accuracy will be possible in the future."^^ . "2003-10-10" . . "4" . . "Biomedcentral"^^ . . . "BMC bioinformatics"^^ . . . "14712105" . . . . . . . . . . . . . . . . . . . "Jonathan D"^^ . "Barber"^^ . "Jonathan D Barber"^^ . . "G.P.S."^^ . "Raghava"^^ . "G.P.S. Raghava"^^ . . "Patrick C"^^ . "Audley"^^ . "Patrick C Audley"^^ . . "Geoffrey J"^^ . "Barton"^^ . "Geoffrey J Barton"^^ . . "Stephen M J"^^ . "Searle"^^ . "Stephen M J Searle"^^ . . . . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (PDF)"^^ . . . . . . "raghava2003.1.pdf"^^ . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (Image (PNG))"^^ . . . . . . "lightbox.jpg"^^ . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (Image (PNG))"^^ . . . . . . "preview.jpg"^^ . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (Image (PNG))"^^ . . . . . . "medium.jpg"^^ . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (Image (PNG))"^^ . . . . . . "small.jpg"^^ . . . "OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy. (Indexer Terms)"^^ . . . . . . "indexcodes.txt"^^ . . "HTML Summary of #93 \n\nOXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.\n\n" . "text/html" . . . "QR Microbiology"@en . .