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Kumar, Manish and Gromiha, M Michael and Raghava, G.P.S. (2011) SVM based prediction of RNA-binding proteins using binding residues and evolutionary information. Journal of molecular recognition : JMR, 24 (2). pp. 303-13. ISSN 1099-1352
Rashid, Mamoon and Singla, Deepak and Sharma, Arun and Kumar, Manish and Raghava, G.P.S. (2009) Hmrbase: a database of hormones and their receptors. BMC genomics, 10. p. 307. ISSN 1471-2164
Arora, Pankaj Kumar and Kumar, Manish and Chauhan, Archana and Raghava, G.P.S. and Jain, R K (2009) OxDBase: a database of oxygenases involved in biodegradation. BMC research notes, 2. p. 67. ISSN 1756-0500
Kumar, Manish and Raghava, G.P.S. (2009) Prediction of nuclear proteins using SVM and HMM models. BMC bioinformatics, 10. p. 22. ISSN 1471-2105
Ahmed, Firoz and Kumar, Manish and Raghava, G.P.S. (2009) Prediction of polyadenylation signals in human DNA sequences using nucleotide frequencies. In silico biology, 9 (3). pp. 135-48. ISSN 1386-6338
Kumar, Manish and Gromiha, M Michael and Raghava, G.P.S. (2008) Prediction of RNA binding sites in a protein using SVM and PSSM profile. Proteins, 71 (1). pp. 189-94. ISSN 1097-0134
Kumar, Manish and Thakur, Varun and Raghava, G.P.S. (2008) COPid: composition based protein identification. In silico biology, 8 (2). pp. 121-8. ISSN 1386-6338
Kalita, Mridul K and Nandal, Umesh K and Pattnaik, Ansuman and Sivalingam, Anandhan and Ramasamy, Gowthaman and Kumar, Manish and Raghava, G.P.S. and Gupta, D (2008) CyclinPred: a SVM-based method for predicting cyclin protein sequences. PloS one, 3 (7). e2605. ISSN 1932-6203
Kumar, Manish and Gromiha, M Michael and Raghava, G.P.S. (2007) Identification of DNA-binding proteins using support vector machines and evolutionary profiles. BMC bioinformatics, 8. p. 463. ISSN 1471-2105
Kumar, Manish and Verma, Ruchi and Raghava, G.P.S. (2007) Mitpred2: an improved method for predicting mitochondrial proteins using SVM and HMM. Nature Protocols. ISSN 2043-0116
Mishra, Nitish K and Kumar, Manish and Raghava, G.P.S. (2007) Support vector machine based prediction of glutathione S-transferase proteins. Protein and peptide letters, 14 (6). pp. 575-580. ISSN 0929-8665
Kumar, Manish and Verma, Ruchi and Raghava, G.P.S. (2006) Prediction of mitochondrial proteins using support vector machine and hidden Markov model. The Journal of biological chemistry, 281 (9). pp. 5357-63. ISSN 0021-9258
Kumar, Manish and Bhasin, Manoj and Natt, Navjot K and Raghava, G.P.S. (2005) BhairPred: prediction of beta-hairpins in a protein from multiple alignment information using ANN and SVM techniques. Nucleic acids research, 33 (Web Se). W154-9. ISSN 1362-4962
Kumar, Manish (2008) Development of bioinformatics tools for functional annotation of proteomes. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
