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Pirhaghi, Mitra and Mamashli, Fatemeh and Moosavi-Movahedi, Faezeh and Arghavani, Payam and Amiri, Ahmad and Davaeil, Bagher and Mohammad-Zaheri, Mahya and Mousavi-Jarrahi, Zahra and Sharma, Deepak and Langel, Ulo and Otzen, Daniel Erik and Saboury, Ali Akbar (2024) Cell-Penetrating Peptides: Promising Therapeutics and Drug-Delivery Systems for Neurodegenerative Diseases. MOLECULAR PHARMACEUTICS, 21 (5). pp. 2097-2117.
Kumar, Prashant and Madhawan, Akansha and Sharma, Akshya and Sharma, Vinita and Das, Deepak and Parveen, Afsana and Fandade, Vikas and Sharma, Deepak and Roy, Joy (2024) A sucrose non-fermenting-1-related protein kinase 1 gene from wheat, TaSnRK1α regulates starch biosynthesis by modulating AGPase activity. PLANT PHYSIOLOGY AND BIOCHEMISTRY, 207.
Bajaj, Manish and Muddassir, Mohd and Choi, Bumjoon and Singh, Priyanka and Park, Jong Bum and Singh, Surjeet and Yadav, Manisha and Kumar, Rajesh and Eom, Kilho and Sharma, Deepak (2023) Single-molecule analysis of osmolyte-mediated nanomechanical unfolding behavior of a protein domain. International journal of biological macromolecules, 253. ISSN 1879-0003
Chauhan, Neeraj Kumar and Anand, Anjali and Sharma, Arun and Dhiman, Kanika and Gosain, Tannu Priya and Singh, Prashant and Singh, Padam and Khan, Eshan and Chattopadhyay, Gopinath and Kumar, Amit and Sharma, Deepak and Sharma, Tarun Kumar and Singh, Ramandeep (2022) Structural and Functional Characterization of Rv0792c from Mycobacterium tuberculosis: Identifying Small Molecule Inhibitor against HutC Protein. MICROBIOLOGY SPECTRUM, 11 (1).
Pirhaghi, Mitra and Frank, Signe Andrea and Alam, Parvez and Nielsen, Janni and Sereikaite , Vita and Gupta, Arpit and Stromgaard, Kristian and Andreasen, Maria and Sharma, Deepak and Ali , Akbar Saboury and Otzen , Daniel Erik (2022) A penetratin-derived peptide reduces the membrane permeabilization and cell toxicity of @-synuclein oligomers. Journal of Biological Chemistry, 298 (12). ISSN 0021-9258
Gaur, Deepika and Kumar, Navinder and Ghosh, Abhirupa and Singh, Prashant and Kumar, Pradeep and Guleria, Jyoti and Kaur, Satinderdeep and Malik , Nikhil and Saha, Sudipto and Nystrom, Thomas and Sharma, Deepak (2022) Ydj1 interaction at nucleotide-binding-domain of yeast Ssa1 impacts Hsp90 collaboration and client maturation. PLoS genetics, 18 (11). ISSN 1553-7404
Garg, Mansi and Sharma, Deepak and Kumar, Rajesh (2022) Analysis of the effect of 1-Allyl-3-Methylimidazolium chloride on thermodynamic stability, folding kinetics, and motional dynamics of horse cytochrome c. BIOPHYSICAL CHEMISTRY, 290.
Kumar, Rajesh and Sharma, Deepak and Kumar, Navinder and Kumari, Beeta and Shabnam, . and Kumar, Sanjeev and Kumar, Rajesh (2022) Substitution of carbonate by non-physiological synergistic anion modulates the stability and iron release kinetics of serum transferrin. Biochimica et biophysica acta, 1871 (1). ISSN 0006-3002
Singh, Prateek and Ujjainiya, Rajat and Prakash, Satyartha and Naushin, Salwa and Sardana, Viren and Bhatheja, Nitin and Singh, Ajay Pratap and Barman, Joydeb and Kumar, Kartik and Gayali, Saurabh and Khan, Raju and Rawat, Birendra Singh and Tallapaka, Karthik Bharadwaj and Anumalla, Mahesh and Lahiri, Amit and Kar, Susanta and Bhosale, Vivek and Srivastava, Mrigank and Mugale, Madhav Nilakanth and Pandey, C. P. and Khan, Shaziya and Katiyar, Shivani and Raj, Desh and Ishteyaque, Sharmeen and Khanka, Sonu and Rani, Ankita and Promila, . and Sharma, Jyotsna and Seth, Anuradha and Dutta, Mukul and Saurabh, Nishant and Veerapandian, Murugan and Venkatachalam, Ganesh and Bansal, Deepak and Gupta, Dinesh and Halami, Prakash M. and Peddha, Muthukumar Serva and Veeranna, Ravindra P. and Pal, Anirban and Singh, Ranvijay Kumar and Anandasadagopan, Suresh Kumar and Karuppanan, Parimala and Rahman, Syed Nasar and Selvakumar, Gopika and Venkatesan, Subramanian and Karmakar, Malay Kumar and Sardana, Harish Kumar and Kothari, Anamika and Parihar, Devendra Singh and Thakur, Anupma and Saifi, Anas and Gupta, Naman and Singh, Yogita and Reddu, Ritu and Gautam, Rizul and Mishra, Anuj and Mishra, Avinash and Gogeri, Iranna and Rayasam, Geethavani and Padwad, Yogendra and Patial, Vikram and Hallan, Vipin and Singh, Damanpreet and Tirpude, Narendra and Chakrabarti, Partha and Maity, Sujay Krishna and Ganguly, Dipyaman and Sistla, Ramakrishna and Balthu, Narender Kumar and Kumar, Kiran A. and Ranjith, Siva and Kumar, B. Vijay and Jamwal, Piyush Singh and Wali, Anshu and Ahmed, Sajad and Chouhan, Rekha and Gandhi, Sumit G. and Sharma, Nancy and Rai, Garima and Irshad, Faisal and Jamwal, Vijay Lakshmi and Paddar, Masroor Ahmad and Khan, Sameer Ullah and Malik, Fayaz and Ghosh, Debashish and Thakkar, Ghanshyam and Barik, S. K. and Tripathi, Prabhanshu and Satija, Yatendra Kumar and Mohanty, Sneha and Khan, Md Tauseef and Subudhi, Umakanta and Sen, Pradip and Kumar, Rashmi and Bhardwaj, Anshu and Gupta, Pawan and Sharma, Deepak and Tuli, Amit and Chaudhuri, Saumya Ray and Krishnamurthi, Srinivasan and Prakash, L. and Rao, Ch and Singh, B. N. and Chaurasiya, Arvindkumar and Chaurasiya, Meera and Bhadange, Mayuri and Likhitkar, Bhagyashree and Mohite, Sharada and Patil, Yogita and Kulkarni, Mahesh and Joshi, Rakesh and Pandya, Vaibhav and Mahajan, Sachin and Patil, Amita and Samson, Rachel and Vare, Tejas and Dharne, Mahesh and Giri, Ashok and Mahajan, Sachin and Paranjape, Shilpa and Sastry, G. Narahari and Kalita, Jatin and Phukan, Tridip and Manna, Prasenjit and Romi, Wahengbam and Bharali, Pankaj and Ozah, Dibyajyoti and Sahu, RaviKumar and Dutta, Prachurjya and Singh, Moirangthem Goutam and Gogoi, Gayatri and Tapadar, Yasmin Begam and Babu, Elapavalooru V. S. S. K. and Sukumaran, Rajeev K. and Nair, Aishwarya R. and Puthiyamadam, Anoop and Valappil, Prajeesh Kooloth and Prasannakumari, Adrash Velayudhan Pillai and Chodankar, Kalpana and Damare, Samir and Agrawal, Ved Varun and Chaudhary, Kumardeep and Agrawal, Anurag and Sengupta, Shantanu and Dash, Debasis (2022) A machine learning-based approach to determine infection status in recipients of BBV152 (Covaxin) whole-virion inactivated SARS-CoV-2 vaccine for serological surveys. COMPUTERS IN BIOLOGY AND MEDICINE, 146.
Bommasamudram, Jyothna and Kumar, Pradeep and Kapur, Sonal and Sharma, Deepak and Devappa, Somashekar (2022) Development of Thermotolerant Lactobacilli Cultures with Improved Probiotic Properties Using Adaptive Laboratory Evolution Method. Probiotics and Antimicrobial Proteins.
Puri, Anuradhika and Singh, Priyanka and Kumar, Navinder and Kumar, Rajesh and Sharma, Deepak (2021) Tah1, A Key Component of R2TP Complex that Regulates Assembly of snoRNP, is Involved in De Novo Generation and Maintenance of Yeast Prion [URE3]. Journal of molecular biology, 433. ISSN 0022-2836
Sharma, Sandeep and Muddassir, Mohd and Muthusamy, Saraladevi and Vaishnav, Pardeep Kumar and Singh, Manish and Sharma, Deepak and Kanagarajan, Selvaraju and Shanmugam, Vijayakumar (2020) A non-classical route of efficient plant uptake verified with fluorescent nanoparticles and root adhesion forces investigated using AFM. Scientific reports, 10 (1). ISSN 2045-2322
Kaur, Jasjeet and Singh, Prashant and Sharma, Deepak and Harjai, Kusum and Chhibber, Sanjay (2020) A potent enzybiotic against methicillin-resistant Staphylococcus aureus. Virus genes, 56 (4). pp. 480-497. ISSN 1572-994X
Gaur, Deepika and Singh, Prashant and Guleria, Jyoti and Gupta, Arpit and Kaur, Satinderdeep and Sharma, Deepak (2020) The Yeast Hsp70 Cochaperone Ydj1 Regulates Functional Distinction of Ssa Hsp70s in the Hsp90 Chaperoning Pathway. GENETICS, 215 (3). pp. 683-698.
Verma, Swati and Kumar, Rajinder and Sharma, Deepak and Gahlot, Hukum and Sharma, Pushpender Kumar and Meghawanshi, Gautam Kumar (2020) Cloning, Characterization, and Structural Modeling of an Extremophilic Bacterial Lipase Isolated From Saline Habitats of the Thar Desert. Applied Biochemistry and Biotechnology. ISSN 0273-2289 (In Press)
Kumar, Rakesh and Mohammad, Ashu and Saini, Reena V and Chahal, Anterpreet and Wong, Chi-Ming and Sharma, Deepak and Kaur, Sukhvir and Kumar, Vikas and Winterbourn, Christine C and Saini, Adesh K (2019) Deciphering the in vivo redox behavior of human peroxiredoxins I and II by expressing in budding yeast. Free radical biology & medicine, 145. pp. 321-329. ISSN 1873-4596
Jain, Rishu and Sharma, Deepak and Kumar, Rakesh and Kumar, Rajesh (2019) Structural, kinetic and thermodynamic characterizations of SDS-induced molten globule state of a highly negatively charged cytochrome c. Journal of biochemistry, 165 (2). pp. 125-137. ISSN 1756-2651
Kumar, Rajesh and Kumar, Rajesh and Sharma, Deepak and Garg, Mansi and Kumar, Vinay and Agarwal, Mukesh Chand (2018) Macromolecular crowding-induced molten globule states of the alkali pH-denatured proteins. Biochimica et biophysica acta. Proteins and proteomics, 1866 (11). pp. 1102-1114. ISSN 1878-1454
Gupta, Arpit and Puri, Anuradhika and Singh, Prashant and Sonam, Surabhi and Pandey, Richa and Sharma, Deepak (2018) The yeast stress inducible Ssa Hsp70 reduces α-synuclein toxicity by promoting its degradation through autophagy. PLoS genetics, 14 (10). e1007751. ISSN 1553-7404
Kumar, Rajesh and Sharma, Deepak and Kumar, Vinay and Kumar, Rajesh (2018) Factors defining the effects of macromolecular crowding on dynamics and thermodynamic stability of heme proteins in-vitro. Archives of biochemistry and biophysics, 654. pp. 146-162. ISSN 1096-0384
Muddassir, Mohd and Manna, Bharat and Singh, Priyanka and Singh, Surjeet and Kumar, Rajesh and Ghosh, Amit and Sharma, Deepak (2018) Single-molecule force-unfolding of titin I27 reveals a correlation between the size of the surrounding anions and its mechanical stability. Chemical communications (Cambridge, England), 54 (69). pp. 9635-9638. ISSN 1364-548X
Jain, Rishu and Agarwal, Mukesh Chand and Kumar, Rakesh and Sharma, Deepak and Kumar, Rajesh (2018) Effects of lyotropic anions on thermodynamic stability and dynamics of horse cytochrome c. Biophysical chemistry, 240. pp. 88-97. ISSN 1873-4200
Kumar, Shailesh and Sharma, Deepak and Kumar, Rajesh (2017) Role of Macromolecular Crowding on Stability and Iron Release Kinetics of Serum Transferrin. The Journal of Physical Chemistry B, 121 (37). pp. 8669-8683. ISSN 1520-6106
Kaur, Harneet and Dolma, Kunzes and Kaur, Navjot and Malhotra, Ankit and Kumar, Navinder and Dixit, Pooja and Sharma, Deepak and Mayilraj, S. and Choudhury, Anirban Roy (2015) Marine microbe as nano-factories for copper biomineralization. Biotechnology and Bioprocess Engineering, 20 (1). pp. 51-57. ISSN 1226-8372
Arora, Garima and Tiwari, Prabhakar and Mandal, Rahul Shubhra and Gupta, Arpit and Sharma, Deepak and Saha, Sudipto and Singh, Ramandeep (2014) High throughput screen identifies small molecule inhibitors specific for Mycobacterium tuberculosis phosphoserine phosphatase. The Journal of biological chemistry, 289 (36). pp. 25149-65. ISSN 1083-351X
Jain, Rishu and Sharma, Deepak and Kumar, Sandeep and Kumar, Rajesh (2014) Factor defining the effects of glycine betaine on the thermodynamic stability and internal dynamics of horse cytochrome C. Biochemistry, 53 (32). pp. 5221-35. ISSN 1520-4995
Kumar, Sandeep and Sharma, Deepak and Kumar, Rajesh and Kumar, Rajesh (2014) Electrostatic effects control the stability and iron release kinetics of ovotransferrin. Journal of biological inorganic chemistry, 19 (6). pp. 1009-24. ISSN 1432-1327
Kumar, Navinder and Gaur, Deepika and Masison, Daniel C and Sharma, Deepak (2014) The BAG homology domain of Snl1 cures yeast prion [URE3] through regulation of Hsp70 chaperones. G3 (Bethesda, Md.), 4 (3). pp. 461-70. ISSN 2160-1836
Kumar, Sandeep and Sharma, Deepak and Kumar, Rajesh (2014) Effect of urea and alkylureas on the stability and structural fluctuation of the M80-containing Ω-loop of horse cytochrome c. Biochimica et biophysica acta, 1844 (3). pp. 641-55. ISSN 0006-3002
Mehta, Ankita and Sonam, Surabhi and Gouri, Isha and Loharch, Saurabh and Sharma, Deepak and Parkesh, Raman (2014) SMMRNA: a database of small molecule modulators of RNA. Nucleic acids research, 42 (Databa). D132-41. ISSN 1362-4962
Malhotra, Ankit and Sharma, Nishat and FNU, Navdezda and Kumar, Navinder and Dolma, Kunzes and Sharma, Deepak and Nandanwar, Hemraj and Roy Choudhury, Anirban (2014) Multi-analytical approach to understand biomineralization of gold using rice bran: A novel and economical route. RSC Advances. ISSN 2046-2069
Khatri, Indu and Kaur, Sukhvir and Devi, Usha and Kumar, Navinder and Sharma, Deepak and Subramanian, Srikrishna and Saini, Adesh K (2013) Draft Genome Sequence of Plant Growth-Promoting Rhizobacterium Pantoea sp. Strain AS-PWVM4. Genome announcements, 1 (6). e00947-13. ISSN 2169-8287
Devi, Usha and Khatri, Indu and Kumar, Navinder and Sharma, Deepak and Subramanian, Srikrishna and Saini, Adesh K (2013) Draft Genome Sequence of Plant-Growth-Promoting Rhizobacterium Serratia fonticola Strain AU-AP2C, Isolated from the Pea Rhizosphere. Genome announcements, 1 (6). ISSN 2169-8287
Jain, Rishu and Sharma, Deepak and Kumar, Rajesh (2013) Effects of alcohols on the stability and low-frequency local motions that control the slow changes in structural dynamics of ferrocytochrome c. Journal of biochemistry, 154 (4). pp. 341-54. ISSN 1756-2651
Sharma, Deepak and Issac, Biju and Raghava, G.P.S. and Ramaswamy, R (2004) Spectral Repeat Finder (SRF): identification of repetitive sequences using Fourier transformation. Bioinformatics (Oxford, England), 20 (9). pp. 1405-12. ISSN 1367-4803
Chauhan, Neeraj Kumar and Anand, Anjali and Sharma, Arun and Dhiman, Kanika and Gosain, Tannu Priya and Singh, Prashant and Singh, Padam and Khan, Eshan and Chattopadhyay, Gopinath and Kumar, Amit and Sharma, Deepak and Sharma, Tarun Kumar and Singh, Ramandeep Structural and Functional Characterization of Rv0792c from Mycobacterium tuberculosis: Identifying Small Molecule Inhibitor against HutC Protein. MICROBIOLOGY SPECTRUM.
