|About ATP Binding proteins|
ATP-binding proteins are members of a protein that is one of the largest, and most ancient proteins present in all extant phyla from prokaryotes to humans. These are transmembrane proteins that function in the transport of a wide variety of substrates across extra- and intracellular membranes, including metabolic products, lipids and sterols, and drugs
ATPint:is a web based tool for prediction of ATP binding residue in protein sequence.It takes amino acid sequence in FASTA format as input and predict the ATP-interacting residues with Support Vector Machine (SVM). These method have been trained and tested using five-fold cross-validation. Residue-wise detail prediction by ATPint is given in tabular format. This table contain three columns (i) amino acid residue, (ii) SVM score and (iii) prediction class.
Please cite following paper, if you are using this server
Chauhan, J.S., Mishra, N.K. and Raghava, G. P. S. (2009) Identification of ATP binding residues of a protein from its primary sequence. BMC Bioinformatics 10:434.