Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
GATA1APPPVCGSCHAEMATOPOIETIC_AND_LYMPHOID_TISSUE13p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115Y5100N
GATA1APPPVCGSCHAEMATOPOIETIC_AND_LYMPHOID_TISSUE13p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKY5100N
GATA1CGSCSGVLHHAEMATOPOIETIC_AND_LYMPHOID_TISSUE18p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1CGSCSGVLHHAEMATOPOIETIC_AND_LYMPHOID_TISSUE18p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1CSGVLHTRIHAEMATOPOIETIC_AND_LYMPHOID_TISSUE21p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N400N
GATA1CSGVLHTRIHAEMATOPOIETIC_AND_LYMPHOID_TISSUE21p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN400N
GATA1DLRAPPPVCHAEMATOPOIETIC_AND_LYMPHOID_TISSUE10p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N200N
GATA1DLRAPPPVCHAEMATOPOIETIC_AND_LYMPHOID_TISSUE10p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN200N
GATA1GDLRAPPPVHAEMATOPOIETIC_AND_LYMPHOID_TISSUE9p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N500N
GATA1GDLRAPPPVHAEMATOPOIETIC_AND_LYMPHOID_TISSUE9p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN500N
GATA1GSCSGVLHTHAEMATOPOIETIC_AND_LYMPHOID_TISSUE19p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N100N
GATA1GSCSGVLHTHAEMATOPOIETIC_AND_LYMPHOID_TISSUE19p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN100N
GATA1GVLHTRIRGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE23p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N000N
GATA1GVLHTRIRGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE23p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN000N
GATA1GVPGDLRAPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE6p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N000N
GATA1GVPGDLRAPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE6p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN000N
GATA1HTRIRGFLPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE26p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N200N
GATA1HTRIRGFLPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE26p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN200N
GATA1LHTRIRGFLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE25p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N804N
GATA1LHTRIRGFLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE25p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN804N
GATA1LRAPPPVCGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE11p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N100N
GATA1LRAPPPVCGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE11p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN100N
GATA1MVPWPGVPGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE1p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N004N
GATA1MVPWPGVPGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE1p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN004N
GATA1PGDLRAPPPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE8p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1PGDLRAPPPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE8p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1PGVPGDLRAHAEMATOPOIETIC_AND_LYMPHOID_TISSUE5p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1PGVPGDLRAHAEMATOPOIETIC_AND_LYMPHOID_TISSUE5p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1PPPVCGSCSHAEMATOPOIETIC_AND_LYMPHOID_TISSUE14p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1PPPVCGSCSHAEMATOPOIETIC_AND_LYMPHOID_TISSUE14p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1PPVCGSCSGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE15p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1PPVCGSCSGHAEMATOPOIETIC_AND_LYMPHOID_TISSUE15p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1PVCGSCSGVHAEMATOPOIETIC_AND_LYMPHOID_TISSUE16p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N000N
GATA1PVCGSCSGVHAEMATOPOIETIC_AND_LYMPHOID_TISSUE16p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN000N
GATA1PWPGVPGDLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE3p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N000N
GATA1PWPGVPGDLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE3p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN000N
GATA1RAPPPVCGSHAEMATOPOIETIC_AND_LYMPHOID_TISSUE12p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N200N
GATA1RAPPPVCGSHAEMATOPOIETIC_AND_LYMPHOID_TISSUE12p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN200N
GATA1SCSGVLHTRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE20p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115Y490N
GATA1SCSGVLHTRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE20p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKY490N
GATA1SGVLHTRIRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE22p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N100N
GATA1SGVLHTRIRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE22p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN100N
GATA1VCGSCSGVLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE17p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N602N
GATA1VCGSCSGVLHAEMATOPOIETIC_AND_LYMPHOID_TISSUE17p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN602N
GATA1VLHTRIRGFHAEMATOPOIETIC_AND_LYMPHOID_TISSUE24p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115Y693N
GATA1VLHTRIRGFHAEMATOPOIETIC_AND_LYMPHOID_TISSUE24p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKY693N
GATA1VPGDLRAPPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE7p.E2fsc.4_5delGAFrame_Shift_Del50.22CMK115N200Y
GATA1VPGDLRAPPHAEMATOPOIETIC_AND_LYMPHOID_TISSUE7p.E2fsc.4_5delGAFrame_Shift_Del50.22CMKN200Y
GATA1VPWPGVPGDHAEMATOPOIETIC_AND_LYMPHOID_TISSUE2p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N200N
GATA1VPWPGVPGDHAEMATOPOIETIC_AND_LYMPHOID_TISSUE2p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN200N
GATA1WPGVPGDLRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE4p.E2fsc.4_5delGAFrame_Shift_Del60.22CMK115N600N
GATA1WPGVPGDLRHAEMATOPOIETIC_AND_LYMPHOID_TISSUE4p.E2fsc.4_5delGAFrame_Shift_Del60.22CMKN600N