Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click HERE


Result Reset Search:
ProteinNeoepitopesTissuePositionProt MutationcDNA MutationMutation TypeNum MismatchPromiscuity (%)Cell LineCTLMHC INHLApredMHC IIBcell
NCOA3AETQYIDSRENDOMETRIUM328p.T330fsc.989_989delCFrame_Shift_Del50.11MFE319N100N
NCOA3CSYLPVLLMENDOMETRIUM622p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N700N
NCOA3ESKGHKNYCENDOMETRIUM614p.K619fsc.1855_1855delAFrame_Shift_Del30.11HEC108N100N
NCOA3ETQYIDSRWENDOMETRIUM329p.T330fsc.989_989delCFrame_Shift_Del50.11MFE319N100N
NCOA3FSSSSQCPAPROSTATE518p.S521fsc.1563_1564delCTFrame_Shift_Del40.11LNCAPCLONEFGCN500N
NCOA3GHAETQYIDENDOMETRIUM326p.T330fsc.989_989delCFrame_Shift_Del40.11MFE319N000N
NCOA3GHKNYCSYLENDOMETRIUM617p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108Y3110N
NCOA3HAETQYIDSENDOMETRIUM327p.T330fsc.989_989delCFrame_Shift_Del50.11MFE319N200N
NCOA3HKNYCSYLPENDOMETRIUM618p.K619fsc.1855_1855delAFrame_Shift_Del60.11HEC108N000N
NCOA3HSFSSSSQCPROSTATE516p.S521fsc.1563_1564delCTFrame_Shift_Del20.11LNCAPCLONEFGCN100N
NCOA3IDSRWLMELENDOMETRIUM333p.T330fsc.989_989delCFrame_Shift_Del50.11MFE319Y690N
NCOA3KGHKNYCSYENDOMETRIUM616p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108Y8120N
NCOA3KNYCSYLPVENDOMETRIUM619p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N1300N
NCOA3LESKGHKNYENDOMETRIUM613p.K619fsc.1855_1855delAFrame_Shift_Del20.11HEC108N600N
NCOA3LLMTGVIPPENDOMETRIUM628p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N0012N
NCOA3LNGHAETQYENDOMETRIUM324p.T330fsc.989_989delCFrame_Shift_Del20.11MFE319N500N
NCOA3LPVLLMTGVENDOMETRIUM625p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N1300N
NCOA3NGHAETQYIENDOMETRIUM325p.T330fsc.989_989delCFrame_Shift_Del30.11MFE319N600N
NCOA3NYCSYLPVLENDOMETRIUM620p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108Y790Y
NCOA3PVLLMTGVIENDOMETRIUM626p.K619fsc.1855_1855delAFrame_Shift_Del60.11HEC108N000N
NCOA3QYIDSRWLMENDOMETRIUM331p.T330fsc.989_989delCFrame_Shift_Del60.11MFE319Y3100N
NCOA3SFSSSSQCPPROSTATE517p.S521fsc.1563_1564delCTFrame_Shift_Del30.11LNCAPCLONEFGCN000N
NCOA3SKGHKNYCSENDOMETRIUM615p.K619fsc.1855_1855delAFrame_Shift_Del40.11HEC108N100N
NCOA3SSQCPASHQPROSTATE521p.S521fsc.1563_1564delCTFrame_Shift_Del40.11LNCAPCLONEFGCN000N
NCOA3SSSQCPASHPROSTATE520p.S521fsc.1563_1564delCTFrame_Shift_Del50.11LNCAPCLONEFGCN000N
NCOA3SSSSQCPASPROSTATE519p.S521fsc.1563_1564delCTFrame_Shift_Del50.11LNCAPCLONEFGCN000N
NCOA3SYLPVLLMTENDOMETRIUM623p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N300N
NCOA3TQYIDSRWLENDOMETRIUM330p.T330fsc.989_989delCFrame_Shift_Del60.11MFE319Y13140N
NCOA3VLLMTGVIPENDOMETRIUM627p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N002N
NCOA3YCSYLPVLLENDOMETRIUM621p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N1002Y
NCOA3YIDSRWLMEENDOMETRIUM332p.T330fsc.989_989delCFrame_Shift_Del60.11MFE319N200N
NCOA3YLPVLLMTGENDOMETRIUM624p.K619fsc.1855_1855delAFrame_Shift_Del50.11HEC108N208N