dbEM

Protein: CDY1

Mutation Data (+)

# Cell Line/Tumor sample Tissue of Origin cDNA change Protein change Source FATHMM Prediction PolyPhen2 Prediction

*NP: Not Predicted
Copy number variation and expression profile (+)

Expression and CNV data is not present for CDY1!!
Gene Essentiality Data (+)

Note: Lower the GARP score (more negative), higher the essentiality of the gene. P-value tells about the significane of GARP score.

test
Tertiary structure (+)

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Modelled Structure Structures available in PDB

2FBM,
Structure Domains (+)

1. PFAM Domains:

Domain ID Domain Name Start Site End Site E-value
PF00385 Chromo 6 57 1.6e-17
PB014969 Pfam-B_14969 83 174 8.6e-20
PF00378 ECH 290 534 1.5e-37

2. Superfamily Domains:

Domain ID Start Site End Site E-value
0038654 284 529 5.64e-55
0051887 3 63 1.78e-18

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1. Variants are not present in 1000 Genomes!!

2. Mutants are not present in CCLE!!

4. Mutants are not present in COSMIC!!

4. Sequence alignment with homologus proteins:

Click on button to get Sequence alignment with Coverage, Consensus and Quality

  Sequence Profiles (+)

HMM
  With Uniprot database     With Mutants      With 1000 Genome Variants
PSSM
  With Uniprot database     With Mutants      With 1000 Genome Variant
Post Translational Modifications (+)

S. No. Position Amino acid Type
1 129 T Phosphorylation

S. No.	Position	Amino acid	Type
1	129	T	Phosphorylation

Modelled Structure	Structures available in PDB
	2FBM,