Predicted Genes

We predicted proteins for Rhodococcus imtechensis RKJ300 and mapped to KEGG pathways using KAAS server. 5,917 OrthologGroup and 182 paralogGroup have been identified by submitting all predicted CDSs from OrthoMLC database.

  • 7,681 predicted CDSs and 50 tRNAs genes
  • 4,847 CDSs have assigned function and 2,834 are hypothetical proteins
  • 5 rRNA genes
  • Gene ontology:- Biological process, 4,579; Cellular component, 1,327; Molecular function, 4,478.

Details of the predicted genes have been incorporated in the manuscript "Genome annotation of Rhodococcus imtechensis RKJ300: Insights into its catabolic and storage potential", Shailesh Kumar, Surendra Vikram, Kumardeep Chaudhary and Gajendra Pal Singh Raghava, Plos one (Submitted).