Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionM. bovis was also the progenitor for the M. bovis bacillus Calmette-Gurein, the most widely used human vaccine. It is 4,345,492-bp genome sequence of M. bovis AF2122/97 and its comparison with the genomes of Mycobacterium tuberculosis and Mycobacterium leprae.
CategoryVaccine strain
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins3918
B cell epitopes (IEDB)95
T cell epitopes (IEDB)217
MHC binder (IEDB)348
No. of Vaccine Target146
B cell prediction (LBtope)4574
Prediction of MHC class II binders (Propred)8582
MHC class I prediction (Propred1)39869
CTL epitope prediction (CTLpred)9389
Prediction of Interferon-gamma inducing peptides (IFNepitope)24236
Prediction of IL4 inducing peptides (IL4pred)37381