Strain Card

The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
DescriptionIt is Korean variant of BCG vaccine strain
CategoryVaccine strain
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins4071
B cell epitopes (IEDB)84
T cell epitopes (IEDB)203
MHC binder (IEDB)347
No. of Vaccine Target125
B cell prediction (LBtope)4170
Prediction of MHC class II binders (Propred)7883
MHC class I prediction (Propred1)36517
CTL epitope prediction (CTLpred)8626
Prediction of Interferon-gamma inducing peptides (IFNepitope)22119
Prediction of IL4 inducing peptides (IL4pred)34303