PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
Total Entries - 1

Entry No. - 1   [TOP]
PolysacDB ID1247
Carbohydrate NameO-polysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
MicrobeBrucella melitensis 16M   (NCBI Taxonomy)   (Drugpedia)
Basic StructureO-polysaccharide is a homopolymer of 4,6-dideoxy-4-formamidoct-D-mannopyranose residues
BCSDB StructureN/A
Proposed functionsN/A
Antigenic Nature used to produce antibodiesB.melitensis 16M formaldehyde-killed cells
Carrier NameNil
Conjugation MethodNil
AntibodiesMab BM3-7
Antibody type and classIgG2b
Assay SystemELISA, immunodiffusion and competitive inhibition assay
Cross-reactivityThis antibody was specific to B. melitiensis and did not cross-reac with O-polysaccharide of B. abortus and Yersinia enterocolitica O:9 polysaccharide
Proposed epitopesThis Mab reacted only with M antigen. The crucial element of the M epitope is a disaccharide, α-D-Rha4NFo(1-->3)α-D Rha4NFo, that requires adjacent α1,2-linked residues for full activity. The common epitope of A and M antigens is a linear α1,2-linked tri or tetrasaccharide
IEDB Epitope76740
Proposed UtilityThis Mab can be used as a use as standard Brucella typing or detection reagents
Curator IDAA + AS
Date of Curation07-04-2010
ReferencesPMC313534


Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036