PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
Total Entries - 1

Entry No. - 1   [TOP]
PolysacDB ID1040
Carbohydrate NameLipopolysaccharide   (Drugpedia)
Carbohydrate ClassLipopolysaccharide
MicrobeChlamydia spp.   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLPS is composed of three parts: (1) lipid A, (2) core polysaccharide, and (3) O antigen. The lipid A region contains two glucosamine sugar derivatives, each with three fatty acids and phosphate or pyrophosphate attached. The core polysaccharide has KDO and attached to lipid A. The side chain O is small polysaccharide chain extending outward from the core, it has several peculiar sugars and varies in composition between bacterial strains.
BCSDB Structure116693
Proposed functionsLPS is most unusual constituents of outer membrane. It plays important role in host defence avoidance. LPS contributes to the negative charge of the bacterial surface. Lipid A is often toxic and act as endotoxin
Antigenic Nature used to produce antibodiesFormalin killed L2 EBs
Carrier NameNil
Conjugation MethodNil
AntibodiesMab L21-6
Antibody type and classIgG3
Assay SystemImmunobloting
Cross-reactivityThis antibody was cross-reactive with Re LPS of S.typhimurium.
Proposed epitopesN/A
IEDB EpitopeN/A
Proposed UtilityMonoclonal antibody L21-6 recognizes chlamydal genus specific epitope.
Curator IDAA + AS
Date of Curation12-01-2010
ReferencesPMC263518


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