PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613

Total Entries - 4
Entry No. - 1 [TOP]

PolysacDB ID	1466
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Helicobacter pylori D273 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab HP15/36
Antibody type and class	IgM
Assay System	ELISA, Immunoelectron microscopy, immunofluorescence and immunoperoxidase assays
Cross-reactivity	This Mab was specific to Helicobacter pylori and did not cross-react with other Helicobacter species (H. fennelliae and H.mustelae) did not react
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab may yield useful information concerning the real surface of the bacterium
Curator ID	AA + AS
Date of Curation	26-07-2010
References	PMC280910

Entry No. - 2 [TOP]

PolysacDB ID	1467
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Helicobacter pylori D273 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab HP37
Antibody type and class	IgM
Assay System	ELISA, Immunoelectron microscopy, immunofluorescence and immunoperoxidase assays
Cross-reactivity	This Mab was specific to Helicobacter pylori and did not cross-react with other Helicobacter species (H. fennelliae and H.mustelae) did not react
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab may yield useful information concerning the real surface of the bacterium
Curator ID	AA + AS
Date of Curation	26-07-2010
References	PMC280910

Entry No. - 3 [TOP]

PolysacDB ID	1468
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Helicobacter pylori D273 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab HP16
Antibody type and class	IgM
Assay System	ELISA, Immunoelectron microscopy, immunofluorescence and immunoperoxidase assays
Cross-reactivity	This Mab was specific to Helicobacter pylori and did not cross-react with other Helicobacter species (H. fennelliae and H.mustelae) did not react
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab may yield useful information concerning the real surface of the bacterium
Curator ID	AA + AS
Date of Curation	27-07-2010
References	PMC280910

Entry No. - 4 [TOP]

PolysacDB ID	1470
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Helicobacter pylori D273 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Polysera
Antibody type and class	N/A
Assay System	ELISA, Immunoelectron microscopy, immunofluorescence and immunoperoxidase assays
Cross-reactivity	This antisera was specific to Helicobacter pylori and did not cross-react with other Helicobacter species (H. fennelliae and H.mustelae) did not react
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This antisera may yield useful information concerning the real surface of the bacterium
Curator ID	AA + AS
Date of Curation	27-07-2010
References	PMC280910

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036