PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613

Total Entries - 11
Entry No. - 1 [TOP]

PolysacDB ID	1701
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-3
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. kansasii, M smegmatis and M gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	10-10-2010
References	PMC1577099

Entry No. - 2 [TOP]

PolysacDB ID	1702
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-6
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. tuberculosis H37 Ra, M. kansasii and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	10-10-2010
References	PMC1577099

Entry No. - 3 [TOP]

PolysacDB ID	1703
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-14
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. tuberculosis H37 Ra, M. kansasii, M. smegmatis, M. gadium, M. flavescence and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	10-10-2010
References	PMC1577099

Entry No. - 4 [TOP]

PolysacDB ID	1704
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-17
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. kansasii and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	11-10-2010
References	PMC1577099

Entry No. - 5 [TOP]

PolysacDB ID	1705
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-19
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. tuberculosis H37 Ra, M. kansasii, M. duvalii and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	11-10-2010
References	PMC1577099

Entry No. - 6 [TOP]

PolysacDB ID	1706
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-23
Antibody type and class	IgG1
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. bovis BCG, M. Kansasii, M. smegmatis, M fortuitum and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	11-10-2010
References	PMC1577099

Entry No. - 7 [TOP]

PolysacDB ID	1707
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-44
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. kansasii and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	11-10-2010
References	PMC1577099

Entry No. - 8 [TOP]

PolysacDB ID	1708
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-45
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	11-10-2010
References	PMC1577099

Entry No. - 9 [TOP]

PolysacDB ID	1709
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-47
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. bovis BCG, M. Kansasii, M. avium, M. terrae and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	12-10-2010
References	PMC1577099

Entry No. - 10 [TOP]

PolysacDB ID	1710
Carbohydrate Name	Glycolipid antigens (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F29-50
Antibody type and class	IgG1
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab cross-reacted with M. bovis BCG, M. Kansasii and M. gastrii
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	12-10-2010
References	PMC1577099

Entry No. - 11 [TOP]

PolysacDB ID	1745
Carbohydrate Name	Lipoarabinomannan (Drugpedia)
Carbohydrate Class	Glycolipid
Microbe	Mycobacterium tuberculosis H37Rv (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab F30-5
Antibody type and class	IgM
Assay System	ELISA, double immunodiffusion, immunofluorescence
Cross-reactivity	This Mab was highly cross-reactive and cross-reacted with M. bovis BCG, M. Kansasii, M. gastrii, M. leprae, M. tuberculosis H37Ra, M. gastrii, M. flavescens, M. fortuitium, M. avium and M. scrofulaceum, M. smegmatis, M. vaccae
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for antigen identification and isolation
Curator ID	AA + AS
Date of Curation	20-10-2010
References	PMC1577099

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