PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613

Total Entries - 8
Entry No. - 1 [TOP]

PolysacDB ID	2153
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-1
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	12-02-2011
References	PMC260467

Entry No. - 2 [TOP]

PolysacDB ID	2154
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-2
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	12-02-2011
References	PMC260467

Entry No. - 3 [TOP]

PolysacDB ID	2155
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-3
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	13-02-2011
References	PMC260467

Entry No. - 4 [TOP]

PolysacDB ID	2156
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-4
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	13-02-2011
References	PMC260467

Entry No. - 5 [TOP]

PolysacDB ID	2157
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-5
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	13-02-2011
References	PMC260467

Entry No. - 6 [TOP]

PolysacDB ID	2158
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-6
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	13-02-2011
References	PMC260467

Entry No. - 7 [TOP]

PolysacDB ID	2159
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-7
Antibody type and class	IgM
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	13-02-2011
References	PMC260467

Entry No. - 8 [TOP]

PolysacDB ID	2160
Carbohydrate Name	O-polysaccharide (Drugpedia)
Carbohydrate Class	Lipopolysaccharide
Microbe	Pseudomonas aeruginosa Serotype O12 (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	20579
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Formalin killed whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab MF35-8
Antibody type and class	N/A
Assay System	ELISA, immunoblotting and Double immunodiffusion
Cross-reactivity	This Mab was specific to its homologous serotype
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab can be used for serotyping of Pseudomonas aeruginosa strains
Curator ID	AA + AS
Date of Curation	14-02-2011
References	PMC260467

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036