PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613

Total Entries - 8
Entry No. - 1 [TOP]

PolysacDB ID	1928
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 1A3
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	This Mab induced zoospore encystment under in vitro conditions
Curator ID	AA + AS
Date of Curation	30-11-2010
References

Entry No. - 2 [TOP]

PolysacDB ID	1929
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 2B6
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	01-12-2010
References

Entry No. - 3 [TOP]

PolysacDB ID	1930
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 1H2
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	01-12-2010
References

Entry No. - 4 [TOP]

PolysacDB ID	1931
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 6F4
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	01-12-2010
References

Entry No. - 5 [TOP]

PolysacDB ID	1932
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 2F6
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	01-12-2010
References

Entry No. - 6 [TOP]

PolysacDB ID	1933
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 8H8
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae and also reacted with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	02-12-2010
References

Entry No. - 7 [TOP]

PolysacDB ID	1934
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 7E3
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae and also reacted with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	02-12-2010
References

Entry No. - 8 [TOP]

PolysacDB ID	1935
Carbohydrate Name	Unknown carbohydrate (Drugpedia)
Carbohydrate Class	Glycoprotein
Microbe	Pythium porphyrae (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab 2D1
Antibody type and class	IgM
Assay System	ELISA, immunofluorscence assay, immunoblotting
Cross-reactivity	This Mab recognized all the isolates of Py. Porphyrae but did not react with the spore components of the higher plant-infecting oomycetes or the obligate parasite Olpidiopsis sp. Infecting Porphyra spp
Proposed epitopes	N/A
IEDB Epitope	N/A
Proposed Utility	N/A
Curator ID	AA + AS
Date of Curation	02-12-2010
References

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036