PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613

Total Entries - 5
Entry No. - 1 [TOP]

PolysacDB ID	2414
Carbohydrate Name	Extracellular polysaccharide (Drugpedia)
Carbohydrate Class	Capsular polysaccharide
Microbe	Streptococcus mutans (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab f77
Antibody type and class	IgM
Assay System	Competitive enzyme immunoassay
Cross-reactivity	This Mab was specific to S. mutans and reacted with serotypes c, e and f
Proposed epitopes	N-acetyl-D-glucosamine residues seemed to be an important part of the epitope
IEDB Epitope	N/A
Proposed Utility	This Mab may be used for the immunological identification of S. mutans among oral bacteria
Curator ID	AA + AS
Date of Curation	04-05-2011
References

Entry No. - 2 [TOP]

PolysacDB ID	2415
Carbohydrate Name	Extracellular polysaccharide (Drugpedia)
Carbohydrate Class	Capsular polysaccharide
Microbe	Streptococcus mutans (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab f89
Antibody type and class	IgG2a
Assay System	Competitive enzyme immunoassay
Cross-reactivity	This Mab was specific to S. mutans and reacted with serotypes c, e and f
Proposed epitopes	N-acetyl-D-glucosamine residues seemed to be an important part of the epitope
IEDB Epitope	N/A
Proposed Utility	This Mab may be used for the immunological identification of S. mutans among oral bacteria
Curator ID	AA + AS
Date of Curation	04-05-2011
References

Entry No. - 3 [TOP]

PolysacDB ID	2416
Carbohydrate Name	Extracellular polysaccharide (Drugpedia)
Carbohydrate Class	Capsular polysaccharide
Microbe	Streptococcus mutans (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab f93
Antibody type and class	IgD
Assay System	Competitive enzyme immunoassay
Cross-reactivity	This Mab was specific to S. mutans and reacted with serotypes c, e and f
Proposed epitopes	N-acetyl-D-glucosamine residues seemed to be an important part of the epitope
IEDB Epitope	N/A
Proposed Utility	This Mab may be used for the immunological identification of S. mutans among oral bacteria
Curator ID	AA + AS
Date of Curation	05-05-2011
References

Entry No. - 4 [TOP]

PolysacDB ID	2417
Carbohydrate Name	Extracellular polysaccharide (Drugpedia)
Carbohydrate Class	Capsular polysaccharide
Microbe	Streptococcus mutans (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab f125
Antibody type and class	IgM
Assay System	Competitive enzyme immunoassay
Cross-reactivity	This Mab was specific to S. mutans and reacted with serotypes c, e and f
Proposed epitopes	N-acetyl-D-glucosamine residues seemed to be an important part of the epitope
IEDB Epitope	N/A
Proposed Utility	This Mab may be used for the immunological identification of S. mutans among oral bacteria
Curator ID	AA + AS
Date of Curation	05-05-2011
References

Entry No. - 5 [TOP]

PolysacDB ID	2418
Carbohydrate Name	Extracellular polysaccharide (Drugpedia)
Carbohydrate Class	Capsular polysaccharide
Microbe	Streptococcus mutans (NCBI Taxonomy) (Drugpedia)
Basic Structure	N/A
BCSDB Structure	N/A
Proposed functions	N/A
Antigenic Nature used to produce antibodies	Whole cells
Carrier Name	Nil
Conjugation Method	Nil
Antibodies	Mab f254
Antibody type and class	IgM
Assay System	Competitive enzyme immunoassay
Cross-reactivity	This Mab was specific to S. mutans and reacted with serotypes c, e and f
Proposed epitopes	N-acetyl-D-glucosamine residues seemed to be an important part of the epitope
IEDB Epitope	N/A
Proposed Utility	This Mab may be used for the immunological identification of S. mutans among oral bacteria
Curator ID	AA + AS
Date of Curation	06-05-2011
References

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036