PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
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PolysacDB ID1612
Carbohydrate NameAntigen 227   (Drugpedia)
Carbohydrate ClassGlycoprotein
Microbe NameMethanosarcina barkeri strain 227   (NCBI Taxonomy)   (Drugpedia)
Basic StructureN/A
BCSDB StructureN/A
Proposed FunctionN/A
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 8A
Antibody Type ClassIgG1
Assay SystemInhibition-blocking experiments, affinity chromatography
Cross ReactivityThis Mab was specific to Methanosarcinae strain 227 and did not react with strain RIM13
Proposed EpitopeGlucose residues seems to be the part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab may help in the elucidation of surface structures of methanosarcinae bacteria
Curator IDAA + AS
Date of Curation23-09-2010
ReferencesPMC214202

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036