PolysacDB: A comprehensive database of microbial polysaccharide antigens and their antibodies

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Citation: Aithal A, Sharma A, Joshi S, Raghava GPS, Varshney GC (2012) PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies. PLoS ONE 7(4): e34613. doi:10.1371/journal.pone.0034613
   
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PolysacDB ID1007
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium tuberculosis   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues, and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureHeat killed Mycobacterium tuberculosis
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 5c11
Antibody Type ClassIgM
Assay SystemIndirect immunofluorescence, ELISA, western blotting
Cross ReactivityThis antibody cross-reacted with large number of mycobacterial species.
Proposed EpitopeArabinose moiety of Lipoarabinomannan
IEDB EpitopeN/A
Proposed UtilityThis antibody has been used in the detection of mycobacteria in clinical samples
Curator IDAA + AS
Date of Curation02-01-2010
ReferencesPMC229406

Record - 2 of 27   [TOP]

PolysacDB ID1010
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium tuberculosis   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues, and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionReported to suppress T cell proliferation and to interfere with gamma interferon-mediated activation of macrophages. Other reported effects include inhibition of protein kinases, inhibition of the synthesis of mRNA encoding IL-2, IL-5, and granulocyte-macrophage colony stimulating factor (GM-CSF) in human T cells and activation of the complement cascade
Antigenic NatureHeat killed Mycobacterium tuberculosis
Carrier NameNil
Conjugate MethodNil
AntibodiesSMITB14
Antibody Type ClassIgG1
Assay SystemN\A
Cross ReactivitySMITB14 bound to whole M. tuberculosis bacteria (H37Rv and Harlingen strains) as well as to the attenuated BCG, but not to other species such as Escherichia coli strains of various O serotypes, Streptococcus pneumoniae isolates, strains of Salmonella, Yersinia enterocolitica and Y. pseudotuberculosis and Nocardia sp.
Proposed EpitopeArabinomannan portion of the antigen
IEDB EpitopeN/A
Proposed UtilityThis antibody might be involved in blocking of mycobacterial invasion. SMITB14 may prevent the uptake of M. tuberculosis through receptor(s) that facilitate bacterial survival and growth.
Curator IDAA + AS
Date of Curation03-01-2010
ReferencesPMC1809178

Record - 3 of 27   [TOP]

PolysacDB ID1011
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium tuberculosis   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues, and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionReported to suppress T cell proliferation and to interfere with gamma interferon-mediated activation of macrophages. Other reported effects include inhibition of protein kinases, inhibition of the synthesis of mRNA encoding IL-2, IL-5, and granulocyte-macrophage colony stimulating factor (GM-CSF) in human T cells and activation of the complement cascade
Antigenic NatureHeat killed Mycobacterium tuberculosis
Carrier NameNil
Conjugate MethodNil
AntibodiesMab lam701
Antibody Type ClassIgG3
Assay SystemSandwich ELISA
Cross ReactivityThis antibody cross-reacted with cross-reacted to a large number of mycobacterial species such as M. tuberculosis, M. bovis, M leprae, M. phlei and M. avium
Proposed EpitopeN\A
IEDB EpitopeN/A
Proposed UtilityThese antibodies could be used to detect mycobacterial antigens in sputum
Curator IDAA + AS
Date of Curation03-01-2010
References2127645

Record - 4 of 27   [TOP]

PolysacDB ID1032
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole killed mycobacteria leprae cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab lam038
Antibody Type ClassIgM
Assay SystemSandwich ELISA
Cross ReactivityThis antibody cross-reacted with cross-reacted to a large number of mycobacterial species such as M. tuberculosis, M. bovis, M leprae, M. phlei and M. avium
Proposed EpitopeN\A
IEDB EpitopeN/A
Proposed UtilityThese antibodies could be used to detect mycobacterial antigens in sputum
Curator IDAA + AS
Date of Curation09-01-2010
References2127645

Record - 5 of 27   [TOP]

PolysacDB ID1033
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole killed mycobacteria leprae cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab lam204
Antibody Type ClassIgM
Assay SystemSandwich ELISA
Cross ReactivityThis antibody cross-reacted with cross-reacted to a large number of mycobacterial species such as M. tuberculosis, M. bovis, M leprae, M. phlei and M. avium
Proposed EpitopeN\A
IEDB EpitopeN/A
Proposed UtilityThese antibodies could be used to detect mycobacterial antigens in sputum
Curator IDAA + AS
Date of Curation09-01-2010
References2127645

Record - 6 of 27   [TOP]

PolysacDB ID1035
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole killed mycobacteria leprae cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab lam603
Antibody Type ClassIgM
Assay SystemSandwich ELISA
Cross ReactivityThis antibody cross-reacted with cross-reacted to a large number of mycobacterial species such as M. tuberculosis, M. bovis, M leprae, M. phlei and M. avium
Proposed EpitopeN\A
IEDB EpitopeN/A
Proposed UtilityThese antibodies could be used to detect mycobacterial antigens in sputum
Curator IDAA + AS
Date of Curation09-01-2010
References2127645

Record - 7 of 27   [TOP]

PolysacDB ID1036
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureMycobacterial lipoarabinomannan is a phosphatidylinositol anchored lipoglycan that consists of an α1-->6 linked backbone, substituted to varying degrees at position 2 with single α-Man residues and directly attached to position 6 of the myo-inositol of a phosphatidylinositol (PI) anchor
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole killed mycobacteria leprae cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab Cs-35
Antibody Type ClassIgM
Assay SystemIndirect and Competitive ELISA
Cross ReactivityThis antibody cross-reacted to M. tuberculosis and other Mycobacterium speices.
Proposed Epitopeβ-D-Araf- (1-->2)-α-D-Araf-(1-->5)-α- D-Araf-(1-->5)-α-D-Araf within the branched hexa-Araf motif of mycobacterial arabinans
IEDB Epitope76797
Proposed UtilityThese antibodies could be used for screening of cell-wall mutants of mycobacteria lacking AG and AraLAM motifs and the recognition of biosynthetic intermediates of cell-wall polysaccharides unique to mycobacteria.
Curator IDAA + AS
Date of Curation10-01-2010
References12368438

Record - 8 of 27   [TOP]

PolysacDB ID1644
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 901
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation27-09-2010
ReferencesPMC259992

Record - 9 of 27   [TOP]

PolysacDB ID1645
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 903
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation27-09-2010
ReferencesPMC259992

Record - 10 of 27   [TOP]

PolysacDB ID1646
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 904
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation27-09-2010
ReferencesPMC259992

Record - 11 of 27   [TOP]

PolysacDB ID1647
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 906
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 12 of 27   [TOP]

PolysacDB ID1648
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 922
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 13 of 27   [TOP]

PolysacDB ID1649
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 908
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 14 of 27   [TOP]

PolysacDB ID1650
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureWhole cells
Carrier NameNil
Conjugate MethodNil
AntibodiesMab 920
Antibody Type ClassIgG3
Assay SystemELISA
Cross ReactivityThis Mab cross-reacted with M. tuberculosis
Proposed EpitopeN/A
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 15 of 27   [TOP]

PolysacDB ID1651
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A6C
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 16 of 27   [TOP]

PolysacDB ID1652
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A10G
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 17 of 27   [TOP]

PolysacDB ID1653
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A11C
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation29-09-2010
ReferencesPMC259992

Record - 18 of 27   [TOP]

PolysacDB ID1654
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A12B
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation30-09-2010
ReferencesPMC259992

Record - 19 of 27   [TOP]

PolysacDB ID1655
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A12C
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation30-09-2010
ReferencesPMC259992

Record - 20 of 27   [TOP]

PolysacDB ID1656
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab A12D
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation30-09-2010
ReferencesPMC259992

Record - 21 of 27   [TOP]

PolysacDB ID1657
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab B10E
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation01-10-2010
ReferencesPMC259992

Record - 22 of 27   [TOP]

PolysacDB ID1658
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab C94
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation01-10-2010
ReferencesPMC259992

Record - 23 of 27   [TOP]

PolysacDB ID1659
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab D1F
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation01-10-2010
ReferencesPMC259992

Record - 24 of 27   [TOP]

PolysacDB ID1660
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab D11E
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation01-10-2010
ReferencesPMC259992

Record - 25 of 27   [TOP]

PolysacDB ID1661
Carbohydrate NameLipoarabinomannan   (Drugpedia)
Carbohydrate ClassGlycolipid
Microbe NameMycobacterium leprae   (NCBI Taxonomy)   (Drugpedia)
Basic StructureLipoarabinomannan is a complex carbohydrate containing arabinose, mannose, glycerol, and myo-inositol 1-phosphate, in addition to lactate, succinate, palmitate, and 10 methyloctadecanoate
BCSDB Structure127448
Proposed FunctionT cell proliferation and to interfere with gamma interferon-mediated activation of macrophages
Antigenic NatureA combination of M. leprae 30KS and 1OKP
Carrier NameNil
Conjugate MethodNil
AntibodiesMab D11G
Antibody Type ClassIgG1
Assay SystemELISA, immunoblotting
Cross ReactivityThis Mab was specific for M. leprae LAM
Proposed Epitopeα(1-->5)-linked arabinofuranosyl residues seemed to be a part of the epitope
IEDB EpitopeN/A
Proposed UtilityThis Mab would help in the structure elucidation of lipoarabinomanna
Curator IDAA + AS
Date of Curation01-10-2010
ReferencesPMC259992

Bioinformatics Centre, Institute of Microbial Technology, Sec - 39A, Chandigarh, India - 160036