HELP HOME MHC & Prediction Algorithms

Sorted Top Scorer

After you submit your sequence, scores will be calculated for all 9-mer subsequences. Based on the score, the subsequences are ranked. The current selected display will return

These values provide a quantitative picture of highest scoring regions in comparrison to threshold. The display is helpfull in selecting potential promiscuous binders or allele specific binders, as it has been proved that the higher the score of any subsequence the higher is it's probability to bind given MHC molecule.
 

 

 
HELP HOME MHC & Prediction Algorithms