RNApin - Prediction of Protein Interacting Nucleotides in a RNA Sequence

RNApin is a Support Vector Machines (SVMs) based web-server for the prediction of Protein Interacting Nucleotides (PINs) in RNA sequences. RNApin is freely available for the acadamic use of global scientific community.

##### Reference: Panwar B, Raghava GP. (2015) Identification of protein-interacting nucleotides in a RNA sequence using composition profile of tri-nucleotides. Genomics. pii: S0888-7543(15)00022-1 #####

An Example of PDB ID 1ASY - Crystal structure of yeast Aspartyl-tRNA synthetase complexed with tRNA^Asp
---| Blue - Protein | Green - RNA | Red - Protein Interacting Nucleotides of tRNA |---

Download Datasets: RNA-1546 and RNA-208 dataset of RNApin