BioPhytMol: A database of Phytomolecules against Mycobacteria

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Page - 1 of 3 Record - 1 of 60 [TOP]

Compound ID

1084

Compound Structure

Plant Source

Ailanthus altissima (Mill.) Swingle syn. Altissima glandulsa Desf. Common Name:Tree of Heaven, Ailanto (English), Aralu (Sanskrit)

Source Family

Simaroubaceae

Origin

India, China

Plant Part Used

Mother tinture

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Rifampin (0.031 µg/ml)

Inhibition [%]

19 %

Activity [MIC] µg/ml

12.5 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Shinjulactone K

PubChem ID

460541

Ethnomedicinal Information

Used for treating mental illness, nausea and headache, treating cardiac palpitation, asthma and epilepsy

PubMed ID [Source Literature]

17276637

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Tetracyclic, Terpene, Triterpene, Quassinoid, Lactone, O-Acetyl, Alcohol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

408.215

Molecular Formula

C₂₂H₃₂O₇

SMILES

O1[C@H]2[C@@]3([C@@H]([C@@]4([C@@H](C2)[C@@H](C[C@H](O)C4=O)C)C)[C@H](O)[C@H](OC(=O)C)[C@@H]([C@@H]3CC1=O)C)C

XLogP

1.595

PSA

110.130

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Gautam R, Saklani A, Jachak SM.Indian medicinal plants as a source of antimycobacterial agents.J Ethnopharmacol. 2007 Mar 21;110(2):200-34

2) Rahman S, Fukamiya N, Okano M, Tagahara K, Lee KH.Anti-tuberculosis activity of quassinoids.Chem Pharm Bull (Tokyo). 1997 Sep;45(9):1527-9

Curator

Record - 2 of 60 [TOP]

Compound ID

1085

Compound Structure

Plant Source

Ailanthus altissima (Mill.) Swingle syn. Altissima glandulsa Desf. Common Name:Tree of Heaven, Ailanto (English), Aralu (Sanskrit)

Source Family

Simaroubaceae

Origin

India, China

Plant Part Used

Mother tinture

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Rifampin (0.031 µg/ml)

Inhibition [%]

17 %

Activity [MIC] µg/ml

12.5 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ailanthone

PubChem ID

72965

Ethnomedicinal Information

Used for treating mental illness, nausea and headache, treating cardiac palpitation, asthma and epilepsy

PubMed ID [Source Literature]

17276637

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Pentacyclic, Terpene, Triterpene, Quassinoid, Furanoid, Lactone, Alcohol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

376.152

Molecular Formula

C₂₀H₂₄O₇

SMILES

O1[C@]2(O)[C@H]3[C@]4([C@H](OC(=O)C[C@H]4C(=C)[C@H]2O)C[C@@H]2[C@@]3([C@H](O)C(=O)C=C2C)C)C1

XLogP

-0.429

PSA

113.290

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

Curator

Record - 3 of 60 [TOP]

Compound ID

1086

Compound Structure

Plant Source

Ailanthus altissima (Mill.) Swingle syn. Altissima glandulsa Desf. Common Name:Tree of Heaven, Ailanto (English), Aralu (Sanskrit)

Source Family

Simaroubaceae

Origin

India, China

Plant Part Used

Mother tinture

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Rifampin (0.031 µg/ml)

Inhibition [%]

15 %

Activity [MIC] µg/ml

12.5 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Shinjudilactone

PubChem ID

460534

Ethnomedicinal Information

Used for treating mental illness, nausea and headache, treating cardiac palpitation, asthma and epilepsy

PubMed ID [Source Literature]

17276637

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Pentacyclic, Terpene, Triterpene, Quassinoid, Lactone

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

376.152

Molecular Formula

C₂₀H₂₄O₇

SMILES

O1[C@H]2[C@]34[C@@H]([C@@]5([C@@H](C2)C(=CC(=O)[C@H]5O)C)C)[C@](O)(C([C@@H]3CC1=O)C)C(=O)OC4

XLogP

0.413

PSA

110.130

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

Curator

Record - 4 of 60 [TOP]

Compound ID	1146
Compound Structure
Plant Source	Aloe chinensis Common Name:
Source Family	Liliaceae
Origin	China
Plant Part Used	Leaf
Extract	Ethanol
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Tuberculosis
PubMed ID [Source Literature]	16695763
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Gottshall RY, Lucas EH, Lickfeldt A, Roberts JM. 1949. The occurrence of antibacterial substances active against Mycobacterium tuberculosis in seed plants. J Clin Invest 28: 920-923
Curator

Record - 5 of 60 [TOP]

Compound ID	1156
Compound Structure
Plant Source	Alpinia Kumatake Mak. Common Name:
Source Family	Zingiberaceae
Origin	China
Plant Part Used
Extract	Alcohol
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml
Activity (In terms of dilution)	1:50 dilution
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Treatment of flatulence (gas), dyspepsia (stomach upset), vomiting, high blood pressure, gastrointestinal complaints and sea sickness
PubMed ID [Source Literature]	14778141
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Wang VF.In vitro antibacterial activity of some common Chinese herbs on Mycobacteria tuberculosis.Chin Med J. 1950 May-Jun;68(5-6):169-72 2) http://www.healthline.com/natstandardcontent/alpinia
Curator

Record - 6 of 60 [TOP]

Compound ID

1297

Compound Structure

Plant Source

Brucea javanica (L.) Merrill syn. Rhus javanica L. Common Name:Java Brucea

Source Family

Simaroubaceae

Origin

India, China

Plant Part Used

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Rifampin

Inhibition [%]

7 %

Activity [MIC] µg/ml

12.5 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Bruceoside D

PubChem ID

460525

Ethnomedicinal Information

Treatment of amoebic dysentery and malaria, stomach complaints

PubMed ID [Source Literature]

9332005

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Pentacyclic, Terpene, Triterpene, Quassinoid, Sugar

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

668.232

Molecular Formula

C₃₁H₄₀O₁₆

SMILES

O1C2([C@H]3[C@]4([C@@H]([C@@]5([C@@H](C[C@H]4OC(=O)[C@@H]3OC(=O)C=C(C)C)[C@@H](C(=O)C(=C5)O[C@@H]3O[C@@H]([C@@H](O)[C@H](O)[C@H]3O)CO)C)C)[C@@H](O)[C@@H]2O)C1)C(=O)O

XLogP

-0.909

PSA

256.040

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Rahman S, Fukamiya N, Okano M, Tagahara K, Lee KH.Anti-tuberculosis activity of quassinoids.Chem Pharm Bull (Tokyo). 1997 Sep;45(9):1527-9

2) http://www.hear.org/pier/commonnames/details/brucea_javanica.htm

Curator

Record - 7 of 60 [TOP]

Compound ID	1445
Compound Structure
Plant Source	Chrysanthum sinense Sab. Common Name:Flos Chrysanthemi
Source Family	Asteraceae (Compositae)
Origin	China
Plant Part Used
Extract	Alcohol
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml
Activity (In terms of dilution)	1:50 dilution
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Used in Chinese medicine in the treatment of allergic reactions and skin irritations
PubMed ID [Source Literature]	14778141
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Wang VF.In vitro antibacterial activity of some common Chinese herbs on Mycobacteria tuberculosis.Chin Med J. 1950 May-Jun;68(5-6):169-72
Curator

Record - 8 of 60 [TOP]

Compound ID

1533

Compound Structure

Plant Source

Coptis coinensia French Common Name:

Source Family

Ranunculaceae

Origin

China

Plant Part Used

Root

Extract

Target Bacteria

Mycobacterium phlei

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

Activity (In terms of dilution)

1:800 dilution

Activity (Zone of inhibition in mm)

Active Compound Identified

Berberine bisulphate

PubChem ID

12457

Ethnomedicinal Information

Tuberculosis

PubMed ID [Source Literature]

14778141

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aromatic, Tetracyclic, Isoquinoline, Sulphate

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

336.124

Molecular Formula

C₂₀H₁₉NO₈S

SMILES

S(=O)(=O)(O)[O-].O1c2cc3CC[n+]4c(c3cc2OC1)cc1c(c4)c(OC)c(OC)cc1

XLogP

2.896

PSA

40.800

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Wang VF.In vitro antibacterial activity of some common Chinese herbs on Mycobacteria tuberculosis.Chin Med J. 1950 May-Jun;68(5-6):169-72

Curator

Record - 9 of 60 [TOP]

Compound ID

1554

Compound Structure

Plant Source

Croton kongensis Common Name:

Source Family

Lamiaceae

Origin

China

Plant Part Used

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

25 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ent - 8, 9 - Seco - 7α, 11β - Diacetoxykaura - 8 (14), 16 - Dien - 9, 15 - Dione

PubChem ID

3010860

Ethnomedicinal Information

Antimalarial activity, tuberculosis, dysmenorrheal treatment

PubMed ID [Source Literature]

12828479, 1511068

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Tricyclic, Terpene, Diterpene, O-Acetyl, Ketone

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

Against Vero, human epidermoid carcinoma in the mouth (KB) and human breast cancer cells (BC)

Molecular Weight

416.220

Molecular Formula

C₂₄H₃₂O₆

SMILES

O([C@@H]1C[C@H]2[C@@](CCCC2(C)C)(C(=O)[C@@H](OC(=O)C)C[C@@H]2C=C1C(=O)C2=C)C)C(=O)C

XLogP

3.668

PSA

86.740

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Thongtan J, Kittakoop P, Ruangrungsi N, Saenboonrueng J, Thebtaranonth Y.New antimycobacterial and antimalarial 8,9-secokaurane diterpenes from Croton kongensis.J Nat Prod. 2003 Jun;66(6):868-70

2) Hendrix PG, Hoylaerts MF, Nouwen EJ, Van de Voorde A, De Broe ME.Magnetic beads in suspension enable a rapid and sensitive immunodetection of human placental alkaline phosphatase.Eur J Clin Chem Clin Biochem. 1992 Jun;30(6):343-7

Curator

Record - 10 of 60 [TOP]

Compound ID

1555

Compound Structure

Plant Source

Croton kongensis Common Name:

Source Family

Lamiaceae

Origin

China

Plant Part Used

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

6.25 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ent - 8, 9 - Seco - 8, 14 - Epoxy - 7α - Hydroxy - 11β - Acetoxy - 16 - Kauren - 9, 15 - Dione

PubChem ID

Ethnomedicinal Information

Antimalarial activity, tuberculosis, dysmenorrheal treatment

PubMed ID [Source Literature]

12828479, 1511068

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Tetracyclic, Terpene, Sesquiterpene, Epoxy, Ketone, O-Acetyl, Alcohol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

Against Vero, human epidermoid carcinoma in the mouth (KB) and human breast cancer cells (BC)

Molecular Weight

376.189

Molecular Formula

C₂₁H₂₈O₆

SMILES

C1CCC([C@@H]2C1C(=O)[C@H](CC1C3C(C(=O)C1=C)(C(C2)O)O3)OC(=O)C)(C)C

XLogP

1.760

PSA

93.200

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

Curator

Record - 11 of 60 [TOP]

Compound ID

1556

Compound Structure

Plant Source

Croton kongensis Common Name:

Source Family

Lamiaceae

Origin

China

Plant Part Used

Extract

Target Bacteria

Mycobacterium tuberculosis

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

6.25 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ent - 8, 9 - Seco - 7α - Hydroxy - 11β - Acetoxykaura - 8 (14), 16 - Dien - 9, 15 - Dione

PubChem ID

3010861

Ethnomedicinal Information

Antimalarial activity, tuberculosis, dysmenorrheal treatment

PubMed ID [Source Literature]

12828479, 1511068

Extract Preparation

N/A

Chemical Classification [Active Compound]

Alicyclic, Tricyclic, Terpene, Diterpene, Ketone, Alcohol, O-Acetyl

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

Against Vero, human epidermoid carcinoma in the mouth (KB) and human breast cancer cells (BC)

Molecular Weight

374.209

Molecular Formula

C₂₂H₃₀O₅

SMILES

O=C1[C@]2([C@@H](C(CCC2)(C)C)C[C@@H](O)C2=C[C@@H](C[C@@H]1OC(=O)C)C(=C)C2=O)C

XLogP

2.928

PSA

80.670

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

Curator

Record - 12 of 60 [TOP]

Compound ID	1918
Compound Structure
Plant Source	Inula helenium L. Common Name:Scabwort, Horse Heal, Wild Sunflower
Source Family	Asteraceae (Compositae)
Origin	Europe and temperate Asia, USA, China
Plant Part Used	Root
Extract	Dichloromethane, hexane
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done
Positive Control Used (conc.)	Rifampin, Clarithromycin
Inhibition [%]	100 %
Activity [MIC] µg/ml	1000 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Used for stomach ulcers and chronic cough, respiratory tract infections, digestive support
PubMed ID [Source Literature]	23195767
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) C.L. Cantrell, N.H. Fischer, L. Urbatsch, M.S. McGuire, S.G. Franzblau.Antimycobacterial crude plant extracts from South, Central, and North America.Phytomedicine, Volume 5, Issue 2, April 1998, Pages 137–145
Curator

Record - 13 of 60 [TOP]

Compound ID	1919
Compound Structure
Plant Source	Inula helenium L. Common Name:Scabwort, Horse Heal, Wild Sunflower
Source Family	Asteraceae (Compositae)
Origin	Europe and Temperate Asia, USA, China
Plant Part Used	Root
Extract	Methanol (12.26 %)
Target Bacteria	Mycobacterium aurum
Assay / Test Done	Broth Microdilution Method (BMM)
Positive Control Used (conc.)	Streptomycin (IC50 value 1.14)
Inhibition [%]
Activity [MIC] µg/ml	500 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Used for stomach ulcers and chronic cough, respiratory tract infections, digestive support
PubMed ID [Source Literature]	11744296
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Newton SM, Lau C, Gurcha SS, Besra GS, Wright CW.The evaluation of forty-three plant species for in vitro antimycobacterial activities; isolation of active constituents from Psoralea corylifolia and Sanguinaria canadensis.J Ethnopharmacol. 2002 Jan;79(1):57-67
Curator

Record - 14 of 60 [TOP]

Compound ID	1920
Compound Structure
Plant Source	Inula helenium L. Common Name:Scabwort, Horse Heal, Wild Sunflower
Source Family	Asteraceae (Compositae)
Origin	Europe and Temperate Asia, USA, China
Plant Part Used	Root
Extract	Methanol (12.26 %)
Target Bacteria	Mycobacterium smegmatis
Assay / Test Done	Broth Microdilution Method (BMM)
Positive Control Used (conc.)	Streptomycin (IC50 value 0.17)
Inhibition [%]
Activity [MIC] µg/ml	500 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Used for stomach ulcers and chronic cough, respiratory tract infections, digestive support
PubMed ID [Source Literature]	11744296
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Newton SM, Lau C, Gurcha SS, Besra GS, Wright CW.The evaluation of forty-three plant species for in vitro antimycobacterial activities; isolation of active constituents from Psoralea corylifolia and Sanguinaria canadensis.J Ethnopharmacol. 2002 Jan;79(1):57-67
Curator

Record - 15 of 60 [TOP]

Compound ID

1069

Compound Structure

Plant Source

Agelica sinensis Common Name:Female Ginseng

Source Family

Apiaceae (Umbelliferae)

Origin

China

Plant Part Used

Root

Extract

Petroleum ether, chloroform

Target Bacteria

Mycobacterium tuberculosis (Erdman)

Assay / Test Done

Microplate Alamar Blue Assay (MABA)

Positive Control Used (conc.)

Rifampin (0.05 µg/ml)

Inhibition [%]

>= 90 %

Activity [MIC] µg/ml

49.5 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Oplopandiol

PubChem ID

6474833

Ethnomedicinal Information

To treat gynecological ailments, fatigue, mild anemia and high blood pressure

PubMed ID [Source Literature]

18567055, 12696940

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aliphatic, Alkene, Alkyne, Alcohol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

262.193

Molecular Formula

C₁₇H₂₆O₂

SMILES

O[C@@H](/C=CCCCCCCC)C#CC#C[C@@H](O)CC

XLogP

4.977

PSA

40.460

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Deng S, Wang Y, Inui T, Chen SN, Farnsworth NR, Cho S, Franzblau SG, Pauli GF.Anti-TB polyynes from the roots of Angelica sinensis.Phytother Res. 2008 Jul;22(7):878-82

2) Zhao KJ, Dong TT, Tu PF, Song ZH, Lo CK, Tsim KW (April 2003).Molecular genetic and chemical assessment of radix Angelica (Danggui) in China. J. Agric. Food Chem. 51 (9): 2576.83

Curator

Record - 16 of 60 [TOP]

Compound ID	2285
Compound Structure
Plant Source	Panax ginseng Common Name:Asian Ginseng, Chinese Ginseng
Source Family	Araliaceae
Origin	China
Plant Part Used	Root
Extract	Methanol
Target Bacteria	Mycobacterium tuberculosis H37Rv
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml	500 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Treatment of diabetes, erectile dysfunction, fatigue, weakness, depression and anxiety
PubMed ID [Source Literature]	113372
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Chang MW, Tasaka H, Kuwabara M, Watanabe T, Matsuo Y.Effects of panax ginseng extracts on the growth of Mycobacterium tuberculosis H37Rv.Hiroshima J Med Sci. 1979 Jun;28(2):115-8
Curator

Record - 17 of 60 [TOP]

Compound ID	2286
Compound Structure
Plant Source	Panax ginseng Common Name:Asian Ginseng, Chinese Ginseng
Source Family	Araliaceae
Origin	China
Plant Part Used	Root
Extract	Ethanol
Target Bacteria	Mycobacterium tuberculosis H37Rv
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml	500 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Treatment of diabetes, erectile dysfunction, fatigue, weakness, depression and anxiety
PubMed ID [Source Literature]	113372
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Chang MW, Tasaka H, Kuwabara M, Watanabe T, Matsuo Y.Effects of panax ginseng extracts on the growth of Mycobacterium tuberculosis H37Rv.Hiroshima J Med Sci. 1979 Jun;28(2):115-8
Curator

Record - 18 of 60 [TOP]

Compound ID	2287
Compound Structure
Plant Source	Panax ginseng Common Name:Asian Ginseng, Chinese Ginseng
Source Family	Araliaceae
Origin	China
Plant Part Used	Root
Extract	Ether
Target Bacteria	Mycobacterium tuberculosis H37Rv
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]
Activity [MIC] µg/ml	100 µg/ml
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Treatment of diabetes, erectile dysfunction, fatigue, weakness, depression and anxiety
PubMed ID [Source Literature]	113372
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Chang MW, Tasaka H, Kuwabara M, Watanabe T, Matsuo Y.Effects of panax ginseng extracts on the growth of Mycobacterium tuberculosis H37Rv.Hiroshima J Med Sci. 1979 Jun;28(2):115-8
Curator

Record - 19 of 60 [TOP]

Compound ID

2317

Compound Structure

Plant Source

Peucedanum ostruthium Koch Common Name:Masterwort

Source Family

Apiaceae (Umbelliferae)

Origin

China

Plant Part Used

Root

Extract

Target Bacteria

Mycobacterium aurum (PI 104 482)

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

1 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ostruthin

PubChem ID

5281420

Ethnomedicinal Information

Has folkloric reputation for the topical treatment of athletes foot

PubMed ID [Source Literature]

12709907

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aromatic, Bicyclic, Coumarin, Prenylated, Phenol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

298.157

Molecular Formula

C₁₉H₂₂O₃

SMILES

O1c2c(cc(C/C=C(/CCC=C(C)C)C)c(O)c2)ccc1=O

XLogP

5.348

PSA

37.300

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Schinkovitz A, Gibbons S, Stavri M, Cocksedge MJ, Bucar F.Ostruthin: an antimycobacterial coumarin from the Roots of Peucedanum ostruthium. Planta Med. 2003 Apr;69(4):369-7

Curator

Record - 20 of 60 [TOP]

Compound ID

2318

Compound Structure

Plant Source

Peucedanum ostruthium Koch Common Name:Masterwort

Source Family

Apiaceae (Umbelliferae)

Origin

China

Plant Part Used

Root

Extract

Target Bacteria

Mycobacterium fortuitum (ATCC 6841)

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

2 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ostruthin

PubChem ID

5281420

Ethnomedicinal Information

Has folkloric reputation for the topical treatment of athletes foot

PubMed ID [Source Literature]

12709907

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aromatic, Bicyclic, Coumarin, Prenylated, Phenol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

298.157

Molecular Formula

C₁₉H₂₂O₃

SMILES

O1c2c(cc(C/C=C(/CCC=C(C)C)C)c(O)c2)ccc1=O

XLogP

5.348

PSA

37.300

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Schinkovitz A, Gibbons S, Stavri M, Cocksedge MJ, Bucar F.Ostruthin: an antimycobacterial coumarin from the Roots of Peucedanum ostruthium. Planta Med. 2003 Apr;69(4):369-7

Curator

Record - 21 of 60 [TOP]

Compound ID

2319

Compound Structure

Plant Source

Peucedanum ostruthium Koch Common Name:Masterwort

Source Family

Apiaceae (Umbelliferae)

Origin

China

Plant Part Used

Root

Extract

Target Bacteria

Mycobacterium phlei (ATCC 11 758)

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

2 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ostruthin

PubChem ID

5281420

Ethnomedicinal Information

Has folkloric reputation for the topical treatment of athletes foot

PubMed ID [Source Literature]

12709907

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aromatic, Bicyclic, Coumarin, Prenylated, Phenol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

298.157

Molecular Formula

C₁₉H₂₂O₃

SMILES

O1c2c(cc(C/C=C(/CCC=C(C)C)C)c(O)c2)ccc1=O

XLogP

5.348

PSA

37.300

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Schinkovitz A, Gibbons S, Stavri M, Cocksedge MJ, Bucar F.Ostruthin: an antimycobacterial coumarin from the Roots of Peucedanum ostruthium. Planta Med. 2003 Apr;69(4):369-7

Curator

Record - 22 of 60 [TOP]

Compound ID

2320

Compound Structure

Plant Source

Peucedanum ostruthium Koch Common Name:Masterwort

Source Family

Apiaceae (Umbelliferae)

Origin

China

Plant Part Used

Root

Extract

Target Bacteria

Mycobacterium smegmatis (ATCC 14468)

Assay / Test Done

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

2 µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

Active Compound Identified

Ostruthin

PubChem ID

5281420

Ethnomedicinal Information

Has folkloric reputation for the topical treatment of athletes foot

PubMed ID [Source Literature]

12709907

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aromatic, Bicyclic, Coumarin, Prenylated, Phenol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

298.157

Molecular Formula

C₁₉H₂₂O₃

SMILES

O1c2c(cc(C/C=C(/CCC=C(C)C)C)c(O)c2)ccc1=O

XLogP

5.348

PSA

37.300

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Schinkovitz A, Gibbons S, Stavri M, Cocksedge MJ, Bucar F.Ostruthin: an antimycobacterial coumarin from the Roots of Peucedanum ostruthium. Planta Med. 2003 Apr;69(4):369-7

Curator

Record - 23 of 60 [TOP]

Compound ID	2339
Compound Structure
Plant Source	Pieris japonica Common Name:Japanese Pieris
Source Family	Ericaceae
Origin	China
Plant Part Used	Leaf
Extract	Water
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done
Positive Control Used (conc.)
Inhibition [%]	100 %
Activity [MIC] µg/ml	1:640 dilution
Activity (In terms of dilution)
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Tuberculosis
PubMed ID [Source Literature]
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Fitzpatrick, F.K.Plant substances achieve against mycobacterium tuberculoses.Antibiotics and Chemotherapy, Vol 4, Pages 528-536
Curator

Record - 24 of 60 [TOP]

Compound ID

2446

Compound Structure

Plant Source

Prunus mume Common Name:Japanese Apricot, Japanese Plum, Chinese Plum

Source Family

Rosaceae

Origin

China

Plant Part Used

Berry

Extract

Target Bacteria

Mycobacterium tuberculosis 607

Assay / Test Done

Paper Disk Method

Positive Control Used (conc.)

Inhibition [%]

Activity [MIC] µg/ml

Activity (In terms of dilution)

Activity (Zone of inhibition in mm)

7.1 mm

Active Compound Identified

Citric acid

PubChem ID

Ethnomedicinal Information

Used as traditional Chinese medicine in stopping ulcers and promoting a strong digestive system and heart

PubMed ID [Source Literature]

4978259, 4978260

Extract Preparation

N/A

Chemical Classification [Active Compound]

Aliphatic, Acid, Alcohol

Media / Broth Used [Antimicrobial Assay/Test]

N/A

Cytotoxicity Assay [AID]

N/A

Molecular Weight

192.027

Molecular Formula

C₆H₈O₇

SMILES

OC(CC(=O)O)(CC(=O)O)C(=O)O

XLogP

-2.247

PSA

132.130

H-bond Donor

H-bond Acceptor

No. of Rotatable Bond Count

No. of Rings

No. of N

No. of O

No. of S

Reference(s)

1) Ma TS, Roper R.Microchemical investigation of medicinal plants. I. The antitubercular principle in Prunus mume and Schizandra chinensis.Mikrochim Acta. 1968;(1):167-81

2) Roper R, Ma TS.Microchemical investigation of medicinal plants. II. The antitubercular activity of some plant acids and their hydrazides.Mikrochim Acta. 1968;(1):212-8

3) Kariyone T, Kimura Y. 196 Japanese and Chinese Medicinal Plants (in Japanese), 3rd edn. Hirokawa: Tokyo, 250-290 AND Li Shih-Chen. 1930. Compendium of Materia Medica (in Chinese), 1st edn, Naking, 1593; revised a

Curator

Record - 25 of 60 [TOP]

Compound ID	2472
Compound Structure
Plant Source	Punica granatum L. Common Name:Pomegranate (English), Daadima, Daadimba (Sanskrit)
Source Family	Punicaceae
Origin	India, China, Malaysia
Plant Part Used	Whole plant
Extract	Ethanol (95 %)
Target Bacteria	Mycobacterium tuberculosis
Assay / Test Done	Tube Dilution Test
Positive Control Used (conc.)
Inhibition [%]	100 %
Activity [MIC] µg/ml
Activity (In terms of dilution)	1:50 dilution
Activity (Zone of inhibition in mm)
Active Compound Identified
PubChem ID	NR
Ethnomedicinal Information	Bronchitis, sore throat, chest troubles, cough
PubMed ID [Source Literature]	14778141
Extract Preparation	N/A
Chemical Classification [Active Compound]	N/A
Media / Broth Used [Antimicrobial Assay/Test]	N/A
Cytotoxicity Assay [AID]	N/A
Reference(s)	1) Wang VF.In vitro antibacterial activity of some common Chinese herbs on Mycobacteria tuberculosis.Chin Med J. 1950 May-Jun;68(5-6):169-72 2) Anon., 1986. The Useful Plants of India. Council of Scientific and Industrial Research, New Delhi, India
Curator

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