BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ebv-miR-bart4*
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-499-3p MIMAT0036939 Ophiophagus hannah miR-499-3p 14 20
dvi-miR-989-3p MIMAT0035603 Drosophila virilis miR-989-3p 14 20
atr-miR8579 MIMAT0033863 Amborella trichopoda miR8579 14 20
ssa-miR-499b-3p MIMAT0032662 Salmo salar miR-499b-3p 14 20
ssa-miR-499a-3p MIMAT0032660 Salmo salar miR-499a-3p 14 20
cbn-miR-7629 MIMAT0029671 Caenorhabditis brenneri miR-7629 14 20
tgu-miR-499-3p MIMAT0027340 Taeniopygia guttata miR-499-3p 14 20
osa-miR5837.2 MIMAT0023313 Oryza sativa miR5837.2 14 20
ola-miR-499 MIMAT0022548 Oryzias latipes miR-499 14 20
aca-miR-499-3p MIMAT0021981 Anolis carolinensis miR-499-3p 14 20
hsa-miR-499b-3p MIMAT0019898 Homo sapiens miR-499b-3p 14 20
tca-miR-989-3p MIMAT0018823 Tribolium castaneum miR-989-3p 14 20
ame-miR-989 MIMAT0018511 Apis mellifera miR-989 14 20
ppy-miR-499-3p MIMAT0015921 Pongo pygmaeus miR-499-3p 14 20
cqu-miR-989 MIMAT0014389 Culex quinquefasciatus miR-989 14 20
aae-miR-989 MIMAT0014239 Aedes aegypti miR-989 14 20
ssc-miR-499-3p MIMAT0017373 Sus scrofa miR-499-3p 14 20
eca-miR-499-3p MIMAT0013109 Equus caballus miR-499-3p 14 20
mdo-miR-499-3p MIMAT0026943 Monodelphis domestica miR-499-3p 14 20
dsi-miR-989 MIMAT0012497 Drosophila simulans miR-989 14 20
dps-miR-989 MIMAT0012218 Drosophila pseudoobscura miR-989 14 20
ptr-miR-499 MIMAT0008172 Pan troglodytes miR-499 14 20
mml-miR-499-3p MIMAT0006362 Macaca mulatta miR-499-3p 14 20
oan-miR-499-3p MIMAT0006950 Ornithorhynchus anatinus miR-499-3p 14 20
aga-miR-989 MIMAT0005529 Anopheles gambiae miR-989 14 20
rno-miR-466c-5p MIMAT0005279 Rattus norvegicus miR-466c-5p 14 20
dme-miR-989-3p MIMAT0005506 Drosophila melanogaster miR-989-3p 14 20
dre-miR-499-3p MIMAT0032009 Danio rerio miR-499-3p 14 20
ebv-miR-BART4-3p MIMAT0009204 Epstein Barr miR-BART4-3p 14 20
rno-miR-499-3p MIMAT0017227 Rattus norvegicus miR-499-3p 14 20
gga-miR-499-3p MIMAT0026634 Gallus gallus miR-499-3p 14 20
hsa-miR-499a-3p MIMAT0004772 Homo sapiens miR-499a-3p 14 20
chi-miR-499-3p MIMAT0036262 Capra hircus miR-499-3p 12 80
rno-miR-5132-3p MIMAT0035751 Rattus norvegicus miR-5132-3p 12 80
bdi-miR9494 MIMAT0035503 Brachypodium distachyon miR9494 12 80
gra-miR8675c MIMAT0034085 Gossypium raimondii miR8675c 12 80
gra-miR8675b MIMAT0034084 Gossypium raimondii miR8675b 12 80
ppc-miR-8335-5p MIMAT0033214 Pristionchus pacificus miR-8335-5p 12 80
ath-miR8177 MIMAT0032776 Arabidopsis thaliana miR8177 12 80
ssa-miR-723-3p MIMAT0032670 Salmo salar miR-723-3p 12 80
ssa-miR-489-3p MIMAT0032658 Salmo salar miR-489-3p 12 80
bbe-miR-4856a-3p MIMAT0031734 Branchiostoma belcheri miR-4856a-3p 12 80
prd-miR-7579-5p MIMAT0030630 Panagrellus redivivus miR-7579-5p 12 80
prd-miR-7908-5p MIMAT0030628 Panagrellus redivivus miR-7908-5p 12 80
prd-miR-7903-5p MIMAT0030618 Panagrellus redivivus miR-7903-5p 12 80
bdi-miR7710-3p MIMAT0030138 Brachypodium distachyon miR7710-3p 12 80
osa-miR7695-3p MIMAT0029962 Oryza sativa miR7695-3p 12 80
ipu-miR-489 MIMAT0029520 Ictalurus punctatus miR-489 12 80
mdo-miR-7353-3p MIMAT0028719 Monodelphis domestica miR-7353-3p 12 80
ccr-miR-489 MIMAT0026308 Cyprinus carpio miR-489 12 80
hsa-miR-7112-3p MIMAT0028122 Homo sapiens miR-7112-3p 12 80
mmu-miR-7090-3p MIMAT0028087 Mus musculus miR-7090-3p 12 80
mmu-miR-6900-3p MIMAT0027701 Mus musculus miR-6900-3p 12 80
hsa-miR-6884-3p MIMAT0027669 Homo sapiens miR-6884-3p 12 80
hme-miR-11 MIMAT0024934 Heliconius melpomene miR-11 12 80
hvu-miR6189 MIMAT0024814 Hordeum vulgare miR6189 12 80
mse-miR-989 MIMAT0024431 Manduca sexta miR-989 12 80
mse-miR-11 MIMAT0024422 Manduca sexta miR-11 12 80
cgr-miR-499-3p MIMAT0023973 Cricetulus griseus miR-499-3p 12 80
bna-miR6034 MIMAT0023654 Brassica napus miR6034 12 80
mtr-miR2593d MIMAT0023154 Medicago truncatula miR2593d 12 80
mtr-miR2593e MIMAT0023148 Medicago truncatula miR2593e 12 80
mtr-miR5742 MIMAT0023120 Medicago truncatula miR5742 12 80
bra-miR5719 MIMAT0023017 Brassica rapa miR5719 12 80
osa-miR5517 MIMAT0022151 Oryza sativa miR5517 12 80
mtr-miR5265 MIMAT0021274 Medicago truncatula miR5265 12 80
bdi-miR5176-3p MIMAT0020721 Brachypodium distachyon miR5176-3p 12 80
csi-miR3949 MIMAT0018490 Citrus sinensis miR3949 12 80
gma-miR4371b MIMAT0018274 Glycine max miR4371b 12 80
gma-miR4371a MIMAT0018273 Glycine max miR4371a 12 80
hsa-miR-3913-3p MIMAT0019225 Homo sapiens miR-3913-3p 12 80
tca-miR-11-3p MIMAT0018855 Tribolium castaneum miR-11-3p 12 80
tca-miR-3834-5p MIMAT0018700 Tribolium castaneum miR-3834-5p 12 80
ame-miR-11 MIMAT0018506 Apis mellifera miR-11 12 80
cin-miR-4208-3p MIMAT0016829 Ciona intestinalis miR-4208-3p 12 80
cin-miR-4198-5p MIMAT0016817 Ciona intestinalis miR-4198-5p 12 80
cin-miR-4151-3p MIMAT0016755 Ciona intestinalis miR-4151-3p 12 80
cin-miR-4056-5p MIMAT0016601 Ciona intestinalis miR-4056-5p 12 80
ahy-miR3520-5p MIMAT0016346 Arachis hypogaea miR3520-5p 12 80
aly-miR856-3p MIMAT0017642 Arabidopsis lyrata miR856-3p 12 80
bmo-miR-989b MIMAT0015627 Bombyx mori miR-989b 12 80
bmo-miR-3354 MIMAT0015540 Bombyx mori miR-3354 12 80
bmo-miR-3325 MIMAT0015512 Bombyx mori miR-3325 12 80
bmo-miR-3271 MIMAT0015456 Bombyx mori miR-3271 12 80
mmu-miR-466o-5p MIMAT0014885 Mus musculus miR-466o-5p 12 80
cqu-miR-11-3p MIMAT0014407 Culex quinquefasciatus miR-11-3p 12 80
aae-miR-11-3p MIMAT0014242 Aedes aegypti miR-11-3p 12 80
bma-miR-2c MIMAT0014098 Brugia malayi miR-2c 12 80
bmo-miR-2851 MIMAT0013783 Bombyx mori miR-2851 12 80
bmo-miR-11-3p MIMAT0013602 Bombyx mori miR-11-3p 12 80
bmo-miR-989a MIMAT0012633 Bombyx mori miR-989a 12 80
dps-miR-2559-3p MIMAT0012381 Drosophila pseudoobscura miR-2559-3p 12 80
bta-miR-2346 MIMAT0011881 Bos taurus miR-2346 12 80
crm-miR-84-3p MIMAT0011560 Caenorhabditis remanei miR-84-3p 12 80
sme-miR-2171 MIMAT0011271 Schmidtea mediterranea miR-2171 12 80
osa-miR2105 MIMAT0010073 Oryza sativa miR2105 12 80
nve-miR-2046-5p MIMAT0009816 Nematostella vectensis miR-2046-5p 12 80
dya-miR-11 MIMAT0009123 Drosophila yakuba miR-11 12 80
dwi-miR-11 MIMAT0009010 Drosophila willistoni miR-11 12 80
dvi-miR-11-3p MIMAT0008916 Drosophila virilis miR-11-3p 12 80
dsi-miR-11 MIMAT0008865 Drosophila simulans miR-11 12 80
dse-miR-11 MIMAT0008788 Drosophila sechellia miR-11 12 80
dpe-miR-11 MIMAT0008737 Drosophila persimilis miR-11 12 80
dmo-miR-11 MIMAT0008679 Drosophila mojavensis miR-11 12 80
dgr-miR-11 MIMAT0008572 Drosophila grimshawi miR-11 12 80
der-miR-11 MIMAT0008500 Drosophila erecta miR-11 12 80
dan-miR-11 MIMAT0008472 Drosophila ananassae miR-11 12 80
aga-miR-11 MIMAT0007856 Anopheles gambiae miR-11 12 80
oan-miR-1419g-3p MIMAT0007323 Ornithorhynchus anatinus miR-1419g-3p 12 80
oan-miR-1421k-3p MIMAT0009179 Ornithorhynchus anatinus miR-1421k-3p 12 80
oan-miR-1421af-3p MIMAT0007265 Ornithorhynchus anatinus miR-1421... 12 80
oan-miR-1419e-3p MIMAT0007263 Ornithorhynchus anatinus miR-1419e-3p 12 80
oan-miR-1421ad-3p MIMAT0007260 Ornithorhynchus anatinus miR-1421... 12 80
mmu-miR-466c-5p MIMAT0004877 Mus musculus miR-466c-5p 12 80
mmu-miR-466b-5p MIMAT0004875 Mus musculus miR-466b-5p 12 80
mdo-miR-383-3p MIMAT0026684 Monodelphis domestica miR-383-3p 12 80
mmu-miR-499-3p MIMAT0017254 Mus musculus miR-499-3p 12 80
dps-miR-11 MIMAT0001215 Drosophila pseudoobscura miR-11 12 80
dme-miR-11-3p MIMAT0000116 Drosophila melanogaster miR-11-3p 12 80
>oha-miR-499-3p MIMAT0036939 Ophiophagus hannah miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>dvi-miR-989-3p MIMAT0035603 Drosophila virilis miR-989-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>atr-miR8579 MIMAT0033863 Amborella trichopoda miR8579
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 7 acatcac 1
>ssa-miR-499b-3p MIMAT0032662 Salmo salar miR-499b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>ssa-miR-499a-3p MIMAT0032660 Salmo salar miR-499a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>cbn-miR-7629 MIMAT0029671 Caenorhabditis brenneri miR-7629
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>tgu-miR-499-3p MIMAT0027340 Taeniopygia guttata miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>osa-miR5837.2 MIMAT0023313 Oryza sativa miR5837.2
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>ola-miR-499 MIMAT0022548 Oryzias latipes miR-499
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>aca-miR-499-3p MIMAT0021981 Anolis carolinensis miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>hsa-miR-499b-3p MIMAT0019898 Homo sapiens miR-499b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>tca-miR-989-3p MIMAT0018823 Tribolium castaneum miR-989-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>ame-miR-989 MIMAT0018511 Apis mellifera miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>ppy-miR-499-3p MIMAT0015921 Pongo pygmaeus miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>cqu-miR-989 MIMAT0014389 Culex quinquefasciatus miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>aae-miR-989 MIMAT0014239 Aedes aegypti miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>ssc-miR-499-3p MIMAT0017373 Sus scrofa miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>eca-miR-499-3p MIMAT0013109 Equus caballus miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>mdo-miR-499-3p MIMAT0026943 Monodelphis domestica miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 1 acatcac 7
>dsi-miR-989 MIMAT0012497 Drosophila simulans miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>dps-miR-989 MIMAT0012218 Drosophila pseudoobscura miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>ptr-miR-499 MIMAT0008172 Pan troglodytes miR-499
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>mml-miR-499-3p MIMAT0006362 Macaca mulatta miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>oan-miR-499-3p MIMAT0006950 Ornithorhynchus anatinus miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>aga-miR-989 MIMAT0005529 Anopheles gambiae miR-989
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>rno-miR-466c-5p MIMAT0005279 Rattus norvegicus miR-466c-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>dme-miR-989-3p MIMAT0005506 Drosophila melanogaster miR-989-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 acatcac 7
|||||||
Sbjct: 8 acatcac 2
>dre-miR-499-3p MIMAT0032009 Danio rerio miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>ebv-miR-BART4-3p MIMAT0009204 Epstein Barr miR-BART4-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>rno-miR-499-3p MIMAT0017227 Rattus norvegicus miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>gga-miR-499-3p MIMAT0026634 Gallus gallus miR-499-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>hsa-miR-499a-3p MIMAT0004772 Homo sapiens miR-499a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 acatcac 7
|||||||
Sbjct: 2 acatcac 8
>chi-miR-499-3p MIMAT0036262 Capra hircus miR-499-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>rno-miR-5132-3p MIMAT0035751 Rattus norvegicus miR-5132-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>bdi-miR9494 MIMAT0035503 Brachypodium distachyon miR9494
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>gra-miR8675c MIMAT0034085 Gossypium raimondii miR8675c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>gra-miR8675b MIMAT0034084 Gossypium raimondii miR8675b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>ppc-miR-8335-5p MIMAT0033214 Pristionchus pacificus miR-8335-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>ath-miR8177 MIMAT0032776 Arabidopsis thaliana miR8177
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>ssa-miR-723-3p MIMAT0032670 Salmo salar miR-723-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>ssa-miR-489-3p MIMAT0032658 Salmo salar miR-489-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>bbe-miR-4856a-3p MIMAT0031734 Branchiostoma belcheri
miR-4856a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>prd-miR-7579-5p MIMAT0030630 Panagrellus redivivus miR-7579-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>prd-miR-7908-5p MIMAT0030628 Panagrellus redivivus miR-7908-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>prd-miR-7903-5p MIMAT0030618 Panagrellus redivivus miR-7903-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>bdi-miR7710-3p MIMAT0030138 Brachypodium distachyon miR7710-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>osa-miR7695-3p MIMAT0029962 Oryza sativa miR7695-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>ipu-miR-489 MIMAT0029520 Ictalurus punctatus miR-489
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>mdo-miR-7353-3p MIMAT0028719 Monodelphis domestica miR-7353-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 1 acatca 6
>ccr-miR-489 MIMAT0026308 Cyprinus carpio miR-489
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>hsa-miR-7112-3p MIMAT0028122 Homo sapiens miR-7112-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>mmu-miR-7090-3p MIMAT0028087 Mus musculus miR-7090-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>mmu-miR-6900-3p MIMAT0027701 Mus musculus miR-6900-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>hsa-miR-6884-3p MIMAT0027669 Homo sapiens miR-6884-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>hme-miR-11 MIMAT0024934 Heliconius melpomene miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>hvu-miR6189 MIMAT0024814 Hordeum vulgare miR6189
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>mse-miR-989 MIMAT0024431 Manduca sexta miR-989
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>mse-miR-11 MIMAT0024422 Manduca sexta miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>cgr-miR-499-3p MIMAT0023973 Cricetulus griseus miR-499-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>bna-miR6034 MIMAT0023654 Brassica napus miR6034
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>mtr-miR2593d MIMAT0023154 Medicago truncatula miR2593d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>mtr-miR2593e MIMAT0023148 Medicago truncatula miR2593e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>mtr-miR5742 MIMAT0023120 Medicago truncatula miR5742
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>bra-miR5719 MIMAT0023017 Brassica rapa miR5719
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>osa-miR5517 MIMAT0022151 Oryza sativa miR5517
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>mtr-miR5265 MIMAT0021274 Medicago truncatula miR5265
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>bdi-miR5176-3p MIMAT0020721 Brachypodium distachyon miR5176-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 7 catcac 2
>csi-miR3949 MIMAT0018490 Citrus sinensis miR3949
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>gma-miR4371b MIMAT0018274 Glycine max miR4371b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>gma-miR4371a MIMAT0018273 Glycine max miR4371a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>hsa-miR-3913-3p MIMAT0019225 Homo sapiens miR-3913-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>tca-miR-11-3p MIMAT0018855 Tribolium castaneum miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>tca-miR-3834-5p MIMAT0018700 Tribolium castaneum miR-3834-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>ame-miR-11 MIMAT0018506 Apis mellifera miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>cin-miR-4208-3p MIMAT0016829 Ciona intestinalis miR-4208-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>cin-miR-4198-5p MIMAT0016817 Ciona intestinalis miR-4198-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>cin-miR-4151-3p MIMAT0016755 Ciona intestinalis miR-4151-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>cin-miR-4056-5p MIMAT0016601 Ciona intestinalis miR-4056-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>ahy-miR3520-5p MIMAT0016346 Arachis hypogaea miR3520-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>aly-miR856-3p MIMAT0017642 Arabidopsis lyrata miR856-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>bmo-miR-989b MIMAT0015627 Bombyx mori miR-989b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>bmo-miR-3354 MIMAT0015540 Bombyx mori miR-3354
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>bmo-miR-3325 MIMAT0015512 Bombyx mori miR-3325
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>bmo-miR-3271 MIMAT0015456 Bombyx mori miR-3271
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>mmu-miR-466o-5p MIMAT0014885 Mus musculus miR-466o-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>cqu-miR-11-3p MIMAT0014407 Culex quinquefasciatus miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>aae-miR-11-3p MIMAT0014242 Aedes aegypti miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>bma-miR-2c MIMAT0014098 Brugia malayi miR-2c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>bmo-miR-2851 MIMAT0013783 Bombyx mori miR-2851
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 7 catcac 2
>bmo-miR-11-3p MIMAT0013602 Bombyx mori miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>bmo-miR-989a MIMAT0012633 Bombyx mori miR-989a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>dps-miR-2559-3p MIMAT0012381 Drosophila pseudoobscura
miR-2559-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>bta-miR-2346 MIMAT0011881 Bos taurus miR-2346
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 8 acatca 3
>crm-miR-84-3p MIMAT0011560 Caenorhabditis remanei miR-84-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 1 acatca 6
>sme-miR-2171 MIMAT0011271 Schmidtea mediterranea miR-2171
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 6 catcac 1
>osa-miR2105 MIMAT0010073 Oryza sativa miR2105
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 catcac 7
||||||
Sbjct: 8 catcac 3
>nve-miR-2046-5p MIMAT0009816 Nematostella vectensis miR-2046-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dya-miR-11 MIMAT0009123 Drosophila yakuba miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dwi-miR-11 MIMAT0009010 Drosophila willistoni miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dvi-miR-11-3p MIMAT0008916 Drosophila virilis miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dsi-miR-11 MIMAT0008865 Drosophila simulans miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dse-miR-11 MIMAT0008788 Drosophila sechellia miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dpe-miR-11 MIMAT0008737 Drosophila persimilis miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dmo-miR-11 MIMAT0008679 Drosophila mojavensis miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dgr-miR-11 MIMAT0008572 Drosophila grimshawi miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>der-miR-11 MIMAT0008500 Drosophila erecta miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dan-miR-11 MIMAT0008472 Drosophila ananassae miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>aga-miR-11 MIMAT0007856 Anopheles gambiae miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>oan-miR-1419g-3p MIMAT0007323 Ornithorhynchus anatinus
miR-1419g-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>oan-miR-1421k-3p MIMAT0009179 Ornithorhynchus anatinus
miR-1421k-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>oan-miR-1421af-3p MIMAT0007265 Ornithorhynchus anatinus
miR-1421af-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>oan-miR-1419e-3p MIMAT0007263 Ornithorhynchus anatinus
miR-1419e-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>oan-miR-1421ad-3p MIMAT0007260 Ornithorhynchus anatinus
miR-1421ad-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 3 catcac 8
>mmu-miR-466c-5p MIMAT0004877 Mus musculus miR-466c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>mmu-miR-466b-5p MIMAT0004875 Mus musculus miR-466b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 acatca 6
||||||
Sbjct: 6 acatca 1
>mdo-miR-383-3p MIMAT0026684 Monodelphis domestica miR-383-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>mmu-miR-499-3p MIMAT0017254 Mus musculus miR-499-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 acatca 6
||||||
Sbjct: 3 acatca 8
>dps-miR-11 MIMAT0001215 Drosophila pseudoobscura miR-11
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
>dme-miR-11-3p MIMAT0000116 Drosophila melanogaster miR-11-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 catcac 7
||||||
Sbjct: 1 catcac 6
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 167
Number of extensions: 135
Number of successful extensions: 119
Number of sequences better than 100.0: 119
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 119
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)