BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= hvt-miR-h14*
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-222b-3p MIMAT0036851 Ophiophagus hannah miR-222b-3p 16 6.9
oha-miR-222a-3p MIMAT0036849 Ophiophagus hannah miR-222a-3p 16 6.9
oha-miR-221-3p MIMAT0036847 Ophiophagus hannah miR-221-3p 16 6.9
tch-miR-222-3p MIMAT0036600 Tupaia chinensis miR-222-3p 16 6.9
tch-miR-221-3p MIMAT0036523 Tupaia chinensis miR-221-3p 16 6.9
chi-miR-222-3p MIMAT0036070 Capra hircus miR-222-3p 16 6.9
chi-miR-221-3p MIMAT0036069 Capra hircus miR-221-3p 16 6.9
ssa-miR-222b-3p MIMAT0032543 Salmo salar miR-222b-3p 16 6.9
ssa-miR-222a-3p MIMAT0032541 Salmo salar miR-222a-3p 16 6.9
ssa-miR-221-5p MIMAT0032539 Salmo salar miR-221-5p 16 6.9
oar-miR-221 MIMAT0030047 Ovis aries miR-221 16 6.9
ipu-miR-221 MIMAT0029476 Ictalurus punctatus miR-221 16 6.9
ccr-miR-222 MIMAT0026274 Cyprinus carpio miR-222 16 6.9
ccr-miR-221 MIMAT0026273 Cyprinus carpio miR-221 16 6.9
gga-miR-222b-3p MIMAT0025618 Gallus gallus miR-222b-3p 16 6.9
pol-miR-221-3p MIMAT0025449 Paralichthys olivaceus miR-221-3p 16 6.9
ggo-miR-222 MIMAT0024092 Gorilla gorilla miR-222 16 6.9
ptr-miR-222 MIMAT0024026 Pan troglodytes miR-222 16 6.9
cgr-miR-222-3p MIMAT0023861 Cricetulus griseus miR-222-3p 16 6.9
cgr-miR-221-3p MIMAT0023859 Cricetulus griseus miR-221-3p 16 6.9
sha-miR-221 MIMAT0022797 Sarcophilus harrisii miR-221 16 6.9
sha-miR-222 MIMAT0022796 Sarcophilus harrisii miR-222 16 6.9
ola-miR-222 MIMAT0022531 Oryzias latipes miR-222 16 6.9
ola-miR-221 MIMAT0022530 Oryzias latipes miR-221 16 6.9
aca-miR-222a-3p MIMAT0021892 Anolis carolinensis miR-222a-3p 16 6.9
aca-miR-221-3p MIMAT0021890 Anolis carolinensis miR-221-3p 16 6.9
pma-miR-222-3p MIMAT0019534 Petromyzon marinus miR-222-3p 16 6.9
pma-miR-221 MIMAT0019532 Petromyzon marinus miR-221 16 6.9
ppy-miR-222 MIMAT0015808 Pongo pygmaeus miR-222 16 6.9
tgu-miR-222-3p MIMAT0014514 Taeniopygia guttata miR-222-3p 16 6.9
tgu-miR-221-3p MIMAT0014512 Taeniopygia guttata miR-221-3p 16 6.9
ssc-miR-222 MIMAT0013942 Sus scrofa miR-222 16 6.9
eca-miR-222 MIMAT0013204 Equus caballus miR-222 16 6.9
eca-miR-221 MIMAT0013203 Equus caballus miR-221 16 6.9
hvt-miR-H14-3p MIMAT0012867 Herpesvirus of miR-H14-3p 16 6.9
dre-miR-222b MIMAT0011303 Danio rerio miR-222b 16 6.9
cfa-miR-222 MIMAT0009851 Canis familiaris miR-222 16 6.9
mmu-miR-1928 MIMAT0009391 Mus musculus miR-1928 16 6.9
ptr-miR-221 MIMAT0008076 Pan troglodytes miR-221 16 6.9
ssc-miR-221-3p MIMAT0007762 Sus scrofa miR-221-3p 16 6.9
cfa-miR-221 MIMAT0006757 Canis familiaris miR-221 16 6.9
mml-miR-222-3p MIMAT0006250 Macaca mulatta miR-222-3p 16 6.9
oan-miR-221-3p MIMAT0007135 Ornithorhynchus anatinus miR-221-3p 16 6.9
oan-miR-222a-3p MIMAT0007133 Ornithorhynchus anatinus miR-222a-3p 16 6.9
oan-miR-222b-3p MIMAT0007057 Ornithorhynchus anatinus miR-222b-3p 16 6.9
mdo-miR-221-3p MIMAT0004160 Monodelphis domestica miR-221-3p 16 6.9
mdo-miR-222a MIMAT0004159 Monodelphis domestica miR-222a 16 6.9
xtr-miR-221 MIMAT0003700 Xenopus tropicalis miR-221 16 6.9
xtr-miR-222 MIMAT0003633 Xenopus tropicalis miR-222 16 6.9
bta-miR-222 MIMAT0003530 Bos taurus miR-222 16 6.9
bta-miR-221 MIMAT0003529 Bos taurus miR-221 16 6.9
tni-miR-221 MIMAT0002907 Tetraodon nigroviridis miR-221 16 6.9
fru-miR-221 MIMAT0002906 Fugu rubripes miR-221 16 6.9
tni-miR-222 MIMAT0002905 Tetraodon nigroviridis miR-222 16 6.9
fru-miR-222 MIMAT0002904 Fugu rubripes miR-222 16 6.9
age-miR-222 MIMAT0002587 Ateles geoffroyi miR-222 16 6.9
ppa-miR-221 MIMAT0002586 Pan paniscus miR-221 16 6.9
ppy-miR-221 MIMAT0002585 Pongo pygmaeus miR-221 16 6.9
ggo-miR-221 MIMAT0002584 Gorilla gorilla miR-221 16 6.9
mml-miR-221-3p MIMAT0002583 Macaca mulatta miR-221-3p 16 6.9
dre-miR-222a-3p MIMAT0001289 Danio rerio miR-222a-3p 16 6.9
dre-miR-221-3p MIMAT0001288 Danio rerio miR-221-3p 16 6.9
gga-miR-221-3p MIMAT0001108 Gallus gallus miR-221-3p 16 6.9
gga-miR-222a MIMAT0001107 Gallus gallus miR-222a 16 6.9
rno-miR-222-3p MIMAT0000891 Rattus norvegicus miR-222-3p 16 6.9
rno-miR-221-3p MIMAT0000890 Rattus norvegicus miR-221-3p 16 6.9
mmu-miR-222-3p MIMAT0000670 Mus musculus miR-222-3p 16 6.9
mmu-miR-221-3p MIMAT0000669 Mus musculus miR-221-3p 16 6.9
hsa-miR-222-3p MIMAT0000279 Homo sapiens miR-222-3p 16 6.9
hsa-miR-221-3p MIMAT0000278 Homo sapiens miR-221-3p 16 6.9
pxy-miR-8544-3p MIMAT0033812 Plutella xylostella miR-8544-3p 14 27
pxy-miR-2756 MIMAT0033749 Plutella xylostella miR-2756 14 27
cin-miR-4080-5p MIMAT0016649 Ciona intestinalis miR-4080-5p 14 27
hsa-miR-548v MIMAT0015020 Homo sapiens miR-548v 14 27
cte-miR-1999 MIMAT0009710 Capitella teleta miR-1999 14 27
gga-miR-1692 MIMAT0007584 Gallus gallus miR-1692 14 27
>oha-miR-222b-3p MIMAT0036851 Ophiophagus hannah miR-222b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oha-miR-222a-3p MIMAT0036849 Ophiophagus hannah miR-222a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oha-miR-221-3p MIMAT0036847 Ophiophagus hannah miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tch-miR-222-3p MIMAT0036600 Tupaia chinensis miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tch-miR-221-3p MIMAT0036523 Tupaia chinensis miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>chi-miR-222-3p MIMAT0036070 Capra hircus miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>chi-miR-221-3p MIMAT0036069 Capra hircus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ssa-miR-222b-3p MIMAT0032543 Salmo salar miR-222b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ssa-miR-222a-3p MIMAT0032541 Salmo salar miR-222a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ssa-miR-221-5p MIMAT0032539 Salmo salar miR-221-5p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oar-miR-221 MIMAT0030047 Ovis aries miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ipu-miR-221 MIMAT0029476 Ictalurus punctatus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ccr-miR-222 MIMAT0026274 Cyprinus carpio miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ccr-miR-221 MIMAT0026273 Cyprinus carpio miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>gga-miR-222b-3p MIMAT0025618 Gallus gallus miR-222b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>pol-miR-221-3p MIMAT0025449 Paralichthys olivaceus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ggo-miR-222 MIMAT0024092 Gorilla gorilla miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ptr-miR-222 MIMAT0024026 Pan troglodytes miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>cgr-miR-222-3p MIMAT0023861 Cricetulus griseus miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>cgr-miR-221-3p MIMAT0023859 Cricetulus griseus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>sha-miR-221 MIMAT0022797 Sarcophilus harrisii miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>sha-miR-222 MIMAT0022796 Sarcophilus harrisii miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ola-miR-222 MIMAT0022531 Oryzias latipes miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ola-miR-221 MIMAT0022530 Oryzias latipes miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>aca-miR-222a-3p MIMAT0021892 Anolis carolinensis miR-222a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>aca-miR-221-3p MIMAT0021890 Anolis carolinensis miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>pma-miR-222-3p MIMAT0019534 Petromyzon marinus miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>pma-miR-221 MIMAT0019532 Petromyzon marinus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ppy-miR-222 MIMAT0015808 Pongo pygmaeus miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tgu-miR-222-3p MIMAT0014514 Taeniopygia guttata miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tgu-miR-221-3p MIMAT0014512 Taeniopygia guttata miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ssc-miR-222 MIMAT0013942 Sus scrofa miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>eca-miR-222 MIMAT0013204 Equus caballus miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>eca-miR-221 MIMAT0013203 Equus caballus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>hvt-miR-H14-3p MIMAT0012867 Herpesvirus of miR-H14-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>dre-miR-222b MIMAT0011303 Danio rerio miR-222b
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>cfa-miR-222 MIMAT0009851 Canis familiaris miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mmu-miR-1928 MIMAT0009391 Mus musculus miR-1928
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ptr-miR-221 MIMAT0008076 Pan troglodytes miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ssc-miR-221-3p MIMAT0007762 Sus scrofa miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>cfa-miR-221 MIMAT0006757 Canis familiaris miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mml-miR-222-3p MIMAT0006250 Macaca mulatta miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oan-miR-221-3p MIMAT0007135 Ornithorhynchus anatinus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oan-miR-222a-3p MIMAT0007133 Ornithorhynchus anatinus
miR-222a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>oan-miR-222b-3p MIMAT0007057 Ornithorhynchus anatinus
miR-222b-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mdo-miR-221-3p MIMAT0004160 Monodelphis domestica miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mdo-miR-222a MIMAT0004159 Monodelphis domestica miR-222a
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>xtr-miR-221 MIMAT0003700 Xenopus tropicalis miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>xtr-miR-222 MIMAT0003633 Xenopus tropicalis miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>bta-miR-222 MIMAT0003530 Bos taurus miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>bta-miR-221 MIMAT0003529 Bos taurus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tni-miR-221 MIMAT0002907 Tetraodon nigroviridis miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>fru-miR-221 MIMAT0002906 Fugu rubripes miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>tni-miR-222 MIMAT0002905 Tetraodon nigroviridis miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>fru-miR-222 MIMAT0002904 Fugu rubripes miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>age-miR-222 MIMAT0002587 Ateles geoffroyi miR-222
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ppa-miR-221 MIMAT0002586 Pan paniscus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ppy-miR-221 MIMAT0002585 Pongo pygmaeus miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>ggo-miR-221 MIMAT0002584 Gorilla gorilla miR-221
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mml-miR-221-3p MIMAT0002583 Macaca mulatta miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>dre-miR-222a-3p MIMAT0001289 Danio rerio miR-222a-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>dre-miR-221-3p MIMAT0001288 Danio rerio miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>gga-miR-221-3p MIMAT0001108 Gallus gallus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>gga-miR-222a MIMAT0001107 Gallus gallus miR-222a
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>rno-miR-222-3p MIMAT0000891 Rattus norvegicus miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>rno-miR-221-3p MIMAT0000890 Rattus norvegicus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mmu-miR-222-3p MIMAT0000670 Mus musculus miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>mmu-miR-221-3p MIMAT0000669 Mus musculus miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>hsa-miR-222-3p MIMAT0000279 Homo sapiens miR-222-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>hsa-miR-221-3p MIMAT0000278 Homo sapiens miR-221-3p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 agctacat 8
||||||||
Sbjct: 1 agctacat 8
>pxy-miR-8544-3p MIMAT0033812 Plutella xylostella miR-8544-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 gctacat 8
|||||||
Sbjct: 8 gctacat 2
>pxy-miR-2756 MIMAT0033749 Plutella xylostella miR-2756
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agctaca 7
|||||||
Sbjct: 7 agctaca 1
>cin-miR-4080-5p MIMAT0016649 Ciona intestinalis miR-4080-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 gctacat 8
|||||||
Sbjct: 2 gctacat 8
>hsa-miR-548v MIMAT0015020 Homo sapiens miR-548v
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 agctaca 7
|||||||
Sbjct: 1 agctaca 7
>cte-miR-1999 MIMAT0009710 Capitella teleta miR-1999
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 gctacat 8
|||||||
Sbjct: 8 gctacat 2
>gga-miR-1692 MIMAT0007584 Gallus gallus miR-1692
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 agctaca 7
|||||||
Sbjct: 7 agctaca 1
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 287
Number of extensions: 141
Number of successful extensions: 130
Number of sequences better than 100.0: 76
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 76
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space: 573248
Effective search space used: 573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)
