BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= kshv-miR-k12-8*
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gra-miR7494b MIMAT0034062 Gossypium raimondii miR7494b 14 20
mmu-miR-7235-5p MIMAT0028438 Mus musculus miR-7235-5p 14 20
mmu-miR-7047-5p MIMAT0027998 Mus musculus miR-7047-5p 14 20
mmu-miR-6965-5p MIMAT0027830 Mus musculus miR-6965-5p 14 20
mml-miR-6133 MIMAT0024626 Macaca mulatta miR-6133 14 20
mml-miR-6130 MIMAT0024623 Macaca mulatta miR-6130 14 20
mml-miR-6129 MIMAT0024622 Macaca mulatta miR-6129 14 20
mml-miR-6127 MIMAT0024619 Macaca mulatta miR-6127 14 20
hsa-miR-6133 MIMAT0024617 Homo sapiens miR-6133 14 20
hsa-miR-6130 MIMAT0024614 Homo sapiens miR-6130 14 20
hsa-miR-6129 MIMAT0024613 Homo sapiens miR-6129 14 20
hsa-miR-6127 MIMAT0024610 Homo sapiens miR-6127 14 20
ptr-miR-6133 MIMAT0024607 Pan troglodytes miR-6133 14 20
ptr-miR-6130 MIMAT0024604 Pan troglodytes miR-6130 14 20
ptr-miR-6129 MIMAT0024603 Pan troglodytes miR-6129 14 20
ptr-miR-6127 MIMAT0024600 Pan troglodytes miR-6127 14 20
bta-miR-149-3p MIMAT0024571 Bos taurus miR-149-3p 14 20
ggo-miR-4510 MIMAT0024109 Gorilla gorilla miR-4510 14 20
ptr-miR-4510 MIMAT0024027 Pan troglodytes miR-4510 14 20
cgr-miR-149-3p MIMAT0023781 Cricetulus griseus miR-149-3p 14 20
hco-miR-265 MIMAT0023508 Haemonchus contortus miR-265 14 20
hco-miR-5940 MIMAT0023435 Haemonchus contortus miR-5940 14 20
bdi-miR319a MIMAT0020712 Brachypodium distachyon miR319a 14 20
hsa-miR-4510 MIMAT0019047 Homo sapiens miR-4510 14 20
hsa-miR-4469 MIMAT0018996 Homo sapiens miR-4469 14 20
hsa-miR-4419a MIMAT0018931 Homo sapiens miR-4419a 14 20
ppy-miR-1238 MIMAT0016168 Pongo pygmaeus miR-1238 14 20
mmu-miR-3103-5p MIMAT0014937 Mus musculus miR-3103-5p 14 20
mml-miR-149-3p MIMAT0026827 Macaca mulatta miR-149-3p 14 20
gga-miR-1599 MIMAT0007465 Gallus gallus miR-1599 14 20
ppt-miR477h MIMAT0005053 Physcomitrella patens miR477h 14 20
kshv-miR-K12-8-5p MIMAT0015216 Kaposi sarcoma-associated miR-K12... 14 20
rno-miR-343 MIMAT0000591 Rattus norvegicus miR-343 14 20
cel-miR-265 MIMAT0000321 Caenorhabditis elegans miR-265 14 20
mmu-miR-149-3p MIMAT0016990 Mus musculus miR-149-3p 14 20
ssc-miR-9835-3p MIMAT0037053 Sus scrofa miR-9835-3p 12 80
dvi-miR-980-5p MIMAT0035595 Drosophila virilis miR-980-5p 12 80
gsa-miR-9393-5p MIMAT0035330 Gyrodactylus salaris miR-9393-5p 12 80
efu-miR-9242 MIMAT0034825 Eptesicus fuscus miR-9242 12 80
pxy-miR-929 MIMAT0033750 Plutella xylostella miR-929 12 80
sma-miR-8421-5p MIMAT0033546 Schistosoma mansoni miR-8421-5p 12 80
bbe-miR-4899-5p MIMAT0031710 Branchiostoma belcheri miR-4899-5p 12 80
bbe-miR-4864-5p MIMAT0031685 Branchiostoma belcheri miR-4864-5p 12 80
ppe-miR395o MIMAT0031493 Prunus persica miR395o 12 80
ppe-miR395b-5p MIMAT0031479 Prunus persica miR395b-5p 12 80
ppe-miR395a-5p MIMAT0031477 Prunus persica miR395a-5p 12 80
rgl-miR7802 MIMAT0032243 Rehmannia glutinosa miR7802 12 80
rgl-miR7798 MIMAT0032239 Rehmannia glutinosa miR7798 12 80
bdi-miR5174d-5p MIMAT0030105 Brachypodium distachyon miR5174d-5p 12 80
bdi-miR5174c-5p MIMAT0030103 Brachypodium distachyon miR5174c-5p 12 80
bdi-miR5174e-5p.2 MIMAT0030067 Brachypodium distachyon miR5174e-... 12 80
mes-miR477g MIMAT0029296 Manihot esculenta miR477g 12 80
mes-miR477f MIMAT0029295 Manihot esculenta miR477f 12 80
mes-miR477e MIMAT0029294 Manihot esculenta miR477e 12 80
mes-miR477d MIMAT0029293 Manihot esculenta miR477d 12 80
mes-miR477c MIMAT0029292 Manihot esculenta miR477c 12 80
mes-miR477b MIMAT0029291 Manihot esculenta miR477b 12 80
mes-miR477a MIMAT0029290 Manihot esculenta miR477a 12 80
gga-miR-7455-3p MIMAT0029065 Gallus gallus miR-7455-3p 12 80
oan-miR-7430-3p MIMAT0029011 Ornithorhynchus anatinus miR-7430-3p 12 80
oan-miR-365-2-5p MIMAT0031067 Ornithorhynchus anatinus miR-365-2-5p 12 80
cme-miR477b MIMAT0026102 Cucumis melo miR477b 12 80
cme-miR477a MIMAT0026089 Cucumis melo miR477a 12 80
hsa-miR-7106-3p MIMAT0028110 Homo sapiens miR-7106-3p 12 80
mmu-miR-6976-3p MIMAT0027855 Mus musculus miR-6976-3p 12 80
mmu-miR-6929-5p MIMAT0027758 Mus musculus miR-6929-5p 12 80
hsa-miR-6892-3p MIMAT0027685 Homo sapiens miR-6892-3p 12 80
hsa-miR-6883-5p MIMAT0027666 Homo sapiens miR-6883-5p 12 80
hsa-miR-6878-5p MIMAT0027656 Homo sapiens miR-6878-5p 12 80
hsa-miR-6875-5p MIMAT0027650 Homo sapiens miR-6875-5p 12 80
hsa-miR-6873-5p MIMAT0027646 Homo sapiens miR-6873-5p 12 80
hsa-miR-6867-3p MIMAT0027635 Homo sapiens miR-6867-3p 12 80
hsa-miR-6834-5p MIMAT0027568 Homo sapiens miR-6834-5p 12 80
hsa-miR-6803-3p MIMAT0027507 Homo sapiens miR-6803-3p 12 80
hsa-miR-6797-5p MIMAT0027494 Homo sapiens miR-6797-5p 12 80
hsa-miR-6754-5p MIMAT0027408 Homo sapiens miR-6754-5p 12 80
ptc-miR477d-5p MIMAT0025275 Populus trichocarpa miR477d-5p 12 80
ppe-miR477b-5p MIMAT0031171 Prunus persica miR477b-5p 12 80
ppe-miR477a-5p MIMAT0031170 Prunus persica miR477a-5p 12 80
mse-miR-929a MIMAT0024498 Manduca sexta miR-929a 12 80
ggo-miR-3126 MIMAT0024261 Gorilla gorilla miR-3126 12 80
ame-miR-6066 MIMAT0023691 Apis mellifera miR-6066 12 80
ame-miR-6059 MIMAT0023683 Apis mellifera miR-6059 12 80
ame-miR-6056 MIMAT0023680 Apis mellifera miR-6056 12 80
hco-miR-5952 MIMAT0023454 Haemonchus contortus miR-5952 12 80
gma-miR5769 MIMAT0023166 Glycine max miR5769 12 80
aca-miR-5405-3p MIMAT0022019 Anolis carolinensis miR-5405-3p 12 80
mtr-miR5284h MIMAT0021342 Medicago truncatula miR5284h 12 80
mtr-miR5284g MIMAT0021341 Medicago truncatula miR5284g 12 80
mtr-miR5284f MIMAT0021340 Medicago truncatula miR5284f 12 80
mtr-miR5284e MIMAT0021339 Medicago truncatula miR5284e 12 80
mtr-miR5284d MIMAT0021338 Medicago truncatula miR5284d 12 80
mtr-miR5284c MIMAT0021337 Medicago truncatula miR5284c 12 80
mtr-miR5284b MIMAT0021336 Medicago truncatula miR5284b 12 80
mtr-miR5284a MIMAT0021335 Medicago truncatula miR5284a 12 80
bdi-miR159a-5p MIMAT0027066 Brachypodium distachyon miR159a-5p 12 80
dme-miR-4962-5p MIMAT0020183 Drosophila melanogaster miR-4962-5p 12 80
bfl-miR-4899 MIMAT0020491 Branchiostoma floridae miR-4899 12 80
bfl-miR-4864-5p MIMAT0020097 Branchiostoma floridae miR-4864-5p 12 80
hsa-miR-4667-3p MIMAT0019744 Homo sapiens miR-4667-3p 12 80
pma-miR-181b-3p MIMAT0019489 Petromyzon marinus miR-181b-3p 12 80
hsa-miR-4441 MIMAT0018959 Homo sapiens miR-4441 12 80
csi-miR477c MIMAT0018477 Citrus sinensis miR477c 12 80
csi-miR477b MIMAT0018476 Citrus sinensis miR477b 12 80
csi-miR477a MIMAT0018475 Citrus sinensis miR477a 12 80
hsa-miR-4270 MIMAT0016900 Homo sapiens miR-4270 12 80
rno-miR-3541 MIMAT0017795 Rattus norvegicus miR-3541 12 80
ppy-miR-920 MIMAT0016130 Pongo pygmaeus miR-920 12 80
hsa-miR-3162-5p MIMAT0015036 Homo sapiens miR-3162-5p 12 80
hsa-miR-3126-5p MIMAT0014989 Homo sapiens miR-3126-5p 12 80
tgu-miR-365-2-5p MIMAT0031088 Taeniopygia guttata miR-365-2-5p 12 80
ssc-miR-365-5p MIMAT0017376 Sus scrofa miR-365-5p 12 80
aqc-miR477c MIMAT0012587 Aquilegia caerulea miR477c 12 80
aqc-miR477b MIMAT0012586 Aquilegia caerulea miR477b 12 80
aqc-miR477a MIMAT0012585 Aquilegia caerulea miR477a 12 80
aqc-miR477e MIMAT0012584 Aquilegia caerulea miR477e 12 80
aqc-miR477g MIMAT0012582 Aquilegia caerulea miR477g 12 80
dsi-miR-929-3p MIMAT0012460 Drosophila simulans miR-929-3p 12 80
dps-miR-929-3p MIMAT0012268 Drosophila pseudoobscura miR-929-3p 12 80
aga-miR-929 MIMAT0010101 Anopheles gambiae miR-929 12 80
osa-miR2103 MIMAT0010071 Oryza sativa miR2103 12 80
bmo-miR-929-3p MIMAT0015289 Bombyx mori miR-929-3p 12 80
mmu-miR-1941-5p MIMAT0009405 Mus musculus miR-1941-5p 12 80
tca-miR-929-3p MIMAT0019133 Tribolium castaneum miR-929-3p 12 80
osa-miR1866-5p MIMAT0007817 Oryza sativa miR1866-5p 12 80
vvi-miR477a MIMAT0006575 Vitis vinifera miR477a 12 80
mml-miR-518c-5p MIMAT0026894 Macaca mulatta miR-518c-5p 12 80
mml-miR-365-2-5p MIMAT0031081 Macaca mulatta miR-365-2-5p 12 80
mml-miR-365-1-5p MIMAT0026856 Macaca mulatta miR-365-1-5p 12 80
gga-miR-1778 MIMAT0007689 Gallus gallus miR-1778 12 80
pta-miR482d MIMAT0006015 Pinus taeda miR482d 12 80
oan-miR-1413-5p MIMAT0026761 Ornithorhynchus anatinus miR-1413-5p 12 80
oan-miR-802-3p MIMAT0007182 Ornithorhynchus anatinus miR-802-3p 12 80
oan-miR-1381-5p MIMAT0007120 Ornithorhynchus anatinus miR-1381-5p 12 80
oan-miR-1375-3p MIMAT0007065 Ornithorhynchus anatinus miR-1375-3p 12 80
hsa-miR-1249-5p MIMAT0032029 Homo sapiens miR-1249-5p 12 80
ppt-miR477b MIMAT0005375 Physcomitrella patens miR477b 12 80
hiv1-miR-H1 MIMAT0004480 Human immunodeficiency miR-H1 12 80
ppt-miR1062 MIMAT0005181 Physcomitrella patens miR1062 12 80
ppt-miR477e MIMAT0005052 Physcomitrella patens miR477e 12 80
ppt-miR477d MIMAT0005051 Physcomitrella patens miR477d 12 80
dme-miR-929-3p MIMAT0005511 Drosophila melanogaster miR-929-3p 12 80
ppt-miR477g-5p MIMAT0004362 Physcomitrella patens miR477g-5p 12 80
ppt-miR477f MIMAT0004361 Physcomitrella patens miR477f 12 80
ppt-miR477a-5p MIMAT0004360 Physcomitrella patens miR477a-5p 12 80
ppt-miR477c MIMAT0004359 Physcomitrella patens miR477c 12 80
mmu-miR-504-3p MIMAT0017277 Mus musculus miR-504-3p 12 80
mdo-miR-365-5p MIMAT0026683 Monodelphis domestica miR-365-5p 12 80
ppt-miR1211-5p MIMAT0003900 Physcomitrella patens miR1211-5p 12 80
mmu-miR-1249-5p MIMAT0014804 Mus musculus miR-1249-5p 12 80
gga-miR-365-2-5p MIMAT0031075 Gallus gallus miR-365-2-5p 12 80
gga-miR-365-1-5p MIMAT0026630 Gallus gallus miR-365-1-5p 12 80
ptc-miR477b MIMAT0002075 Populus trichocarpa miR477b 12 80
ptc-miR477a-5p MIMAT0002074 Populus trichocarpa miR477a-5p 12 80
rno-miR-365-5p MIMAT0017184 Rattus norvegicus miR-365-5p 12 80
rno-miR-347 MIMAT0000598 Rattus norvegicus miR-347 12 80
hsa-miR-149-3p MIMAT0004609 Homo sapiens miR-149-3p 12 80
>gra-miR7494b MIMAT0034062 Gossypium raimondii miR7494b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mmu-miR-7235-5p MIMAT0028438 Mus musculus miR-7235-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mmu-miR-7047-5p MIMAT0027998 Mus musculus miR-7047-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mmu-miR-6965-5p MIMAT0027830 Mus musculus miR-6965-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mml-miR-6133 MIMAT0024626 Macaca mulatta miR-6133
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mml-miR-6130 MIMAT0024623 Macaca mulatta miR-6130
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mml-miR-6129 MIMAT0024622 Macaca mulatta miR-6129
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mml-miR-6127 MIMAT0024619 Macaca mulatta miR-6127
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-6133 MIMAT0024617 Homo sapiens miR-6133
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-6130 MIMAT0024614 Homo sapiens miR-6130
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-6129 MIMAT0024613 Homo sapiens miR-6129
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-6127 MIMAT0024610 Homo sapiens miR-6127
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ptr-miR-6133 MIMAT0024607 Pan troglodytes miR-6133
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ptr-miR-6130 MIMAT0024604 Pan troglodytes miR-6130
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ptr-miR-6129 MIMAT0024603 Pan troglodytes miR-6129
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ptr-miR-6127 MIMAT0024600 Pan troglodytes miR-6127
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>bta-miR-149-3p MIMAT0024571 Bos taurus miR-149-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 7 ctccctc 1
>ggo-miR-4510 MIMAT0024109 Gorilla gorilla miR-4510
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ptr-miR-4510 MIMAT0024027 Pan troglodytes miR-4510
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>cgr-miR-149-3p MIMAT0023781 Cricetulus griseus miR-149-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 7 ctccctc 1
>hco-miR-265 MIMAT0023508 Haemonchus contortus miR-265
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hco-miR-5940 MIMAT0023435 Haemonchus contortus miR-5940
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>bdi-miR319a MIMAT0020712 Brachypodium distachyon miR319a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-4510 MIMAT0019047 Homo sapiens miR-4510
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>hsa-miR-4469 MIMAT0018996 Homo sapiens miR-4469
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctccctc 7
|||||||
Sbjct: 2 ctccctc 8
>hsa-miR-4419a MIMAT0018931 Homo sapiens miR-4419a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ppy-miR-1238 MIMAT0016168 Pongo pygmaeus miR-1238
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctccctc 7
|||||||
Sbjct: 1 ctccctc 7
>mmu-miR-3103-5p MIMAT0014937 Mus musculus miR-3103-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mml-miR-149-3p MIMAT0026827 Macaca mulatta miR-149-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 7 ctccctc 1
>gga-miR-1599 MIMAT0007465 Gallus gallus miR-1599
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>ppt-miR477h MIMAT0005053 Physcomitrella patens miR477h
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctccctc 7
|||||||
Sbjct: 2 ctccctc 8
>kshv-miR-K12-8-5p MIMAT0015216 Kaposi sarcoma-associated
miR-K12-8-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctccctc 7
|||||||
Sbjct: 2 ctccctc 8
>rno-miR-343 MIMAT0000591 Rattus norvegicus miR-343
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 ctccctc 7
|||||||
Sbjct: 2 ctccctc 8
>cel-miR-265 MIMAT0000321 Caenorhabditis elegans miR-265
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 8 ctccctc 2
>mmu-miR-149-3p MIMAT0016990 Mus musculus miR-149-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 ctccctc 7
|||||||
Sbjct: 7 ctccctc 1
>ssc-miR-9835-3p MIMAT0037053 Sus scrofa miR-9835-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>dvi-miR-980-5p MIMAT0035595 Drosophila virilis miR-980-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>gsa-miR-9393-5p MIMAT0035330 Gyrodactylus salaris miR-9393-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>efu-miR-9242 MIMAT0034825 Eptesicus fuscus miR-9242
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>pxy-miR-929 MIMAT0033750 Plutella xylostella miR-929
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>sma-miR-8421-5p MIMAT0033546 Schistosoma mansoni miR-8421-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>bbe-miR-4899-5p MIMAT0031710 Branchiostoma belcheri miR-4899-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>bbe-miR-4864-5p MIMAT0031685 Branchiostoma belcheri miR-4864-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>ppe-miR395o MIMAT0031493 Prunus persica miR395o
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>ppe-miR395b-5p MIMAT0031479 Prunus persica miR395b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>ppe-miR395a-5p MIMAT0031477 Prunus persica miR395a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>rgl-miR7802 MIMAT0032243 Rehmannia glutinosa miR7802
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>rgl-miR7798 MIMAT0032239 Rehmannia glutinosa miR7798
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>bdi-miR5174d-5p MIMAT0030105 Brachypodium distachyon
miR5174d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>bdi-miR5174c-5p MIMAT0030103 Brachypodium distachyon
miR5174c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>bdi-miR5174e-5p.2 MIMAT0030067 Brachypodium distachyon
miR5174e-5p.2
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477g MIMAT0029296 Manihot esculenta miR477g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477f MIMAT0029295 Manihot esculenta miR477f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477e MIMAT0029294 Manihot esculenta miR477e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477d MIMAT0029293 Manihot esculenta miR477d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477c MIMAT0029292 Manihot esculenta miR477c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477b MIMAT0029291 Manihot esculenta miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mes-miR477a MIMAT0029290 Manihot esculenta miR477a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>gga-miR-7455-3p MIMAT0029065 Gallus gallus miR-7455-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>oan-miR-7430-3p MIMAT0029011 Ornithorhynchus anatinus
miR-7430-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>oan-miR-365-2-5p MIMAT0031067 Ornithorhynchus anatinus
miR-365-2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>cme-miR477b MIMAT0026102 Cucumis melo miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>cme-miR477a MIMAT0026089 Cucumis melo miR477a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>hsa-miR-7106-3p MIMAT0028110 Homo sapiens miR-7106-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mmu-miR-6976-3p MIMAT0027855 Mus musculus miR-6976-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mmu-miR-6929-5p MIMAT0027758 Mus musculus miR-6929-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-6892-3p MIMAT0027685 Homo sapiens miR-6892-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>hsa-miR-6883-5p MIMAT0027666 Homo sapiens miR-6883-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-6878-5p MIMAT0027656 Homo sapiens miR-6878-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-6875-5p MIMAT0027650 Homo sapiens miR-6875-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 7 tccctc 2
>hsa-miR-6873-5p MIMAT0027646 Homo sapiens miR-6873-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>hsa-miR-6867-3p MIMAT0027635 Homo sapiens miR-6867-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>hsa-miR-6834-5p MIMAT0027568 Homo sapiens miR-6834-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>hsa-miR-6803-3p MIMAT0027507 Homo sapiens miR-6803-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>hsa-miR-6797-5p MIMAT0027494 Homo sapiens miR-6797-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>hsa-miR-6754-5p MIMAT0027408 Homo sapiens miR-6754-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>ptc-miR477d-5p MIMAT0025275 Populus trichocarpa miR477d-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>ppe-miR477b-5p MIMAT0031171 Prunus persica miR477b-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>ppe-miR477a-5p MIMAT0031170 Prunus persica miR477a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>mse-miR-929a MIMAT0024498 Manduca sexta miR-929a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>ggo-miR-3126 MIMAT0024261 Gorilla gorilla miR-3126
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 7 tccctc 2
>ame-miR-6066 MIMAT0023691 Apis mellifera miR-6066
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>ame-miR-6059 MIMAT0023683 Apis mellifera miR-6059
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>ame-miR-6056 MIMAT0023680 Apis mellifera miR-6056
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>hco-miR-5952 MIMAT0023454 Haemonchus contortus miR-5952
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 7 tccctc 2
>gma-miR5769 MIMAT0023166 Glycine max miR5769
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 7 tccctc 2
>aca-miR-5405-3p MIMAT0022019 Anolis carolinensis miR-5405-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>mtr-miR5284h MIMAT0021342 Medicago truncatula miR5284h
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284g MIMAT0021341 Medicago truncatula miR5284g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284f MIMAT0021340 Medicago truncatula miR5284f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284e MIMAT0021339 Medicago truncatula miR5284e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284d MIMAT0021338 Medicago truncatula miR5284d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284c MIMAT0021337 Medicago truncatula miR5284c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284b MIMAT0021336 Medicago truncatula miR5284b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mtr-miR5284a MIMAT0021335 Medicago truncatula miR5284a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>bdi-miR159a-5p MIMAT0027066 Brachypodium distachyon miR159a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>dme-miR-4962-5p MIMAT0020183 Drosophila melanogaster
miR-4962-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>bfl-miR-4899 MIMAT0020491 Branchiostoma floridae miR-4899
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>bfl-miR-4864-5p MIMAT0020097 Branchiostoma floridae miR-4864-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-4667-3p MIMAT0019744 Homo sapiens miR-4667-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>pma-miR-181b-3p MIMAT0019489 Petromyzon marinus miR-181b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>hsa-miR-4441 MIMAT0018959 Homo sapiens miR-4441
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>csi-miR477c MIMAT0018477 Citrus sinensis miR477c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>csi-miR477b MIMAT0018476 Citrus sinensis miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>csi-miR477a MIMAT0018475 Citrus sinensis miR477a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>hsa-miR-4270 MIMAT0016900 Homo sapiens miR-4270
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>rno-miR-3541 MIMAT0017795 Rattus norvegicus miR-3541
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>ppy-miR-920 MIMAT0016130 Pongo pygmaeus miR-920
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-3162-5p MIMAT0015036 Homo sapiens miR-3162-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>hsa-miR-3126-5p MIMAT0014989 Homo sapiens miR-3126-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 7 tccctc 2
>tgu-miR-365-2-5p MIMAT0031088 Taeniopygia guttata miR-365-2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>ssc-miR-365-5p MIMAT0017376 Sus scrofa miR-365-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>aqc-miR477c MIMAT0012587 Aquilegia caerulea miR477c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>aqc-miR477b MIMAT0012586 Aquilegia caerulea miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>aqc-miR477a MIMAT0012585 Aquilegia caerulea miR477a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>aqc-miR477e MIMAT0012584 Aquilegia caerulea miR477e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>aqc-miR477g MIMAT0012582 Aquilegia caerulea miR477g
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>dsi-miR-929-3p MIMAT0012460 Drosophila simulans miR-929-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>dps-miR-929-3p MIMAT0012268 Drosophila pseudoobscura miR-929-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>aga-miR-929 MIMAT0010101 Anopheles gambiae miR-929
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>osa-miR2103 MIMAT0010071 Oryza sativa miR2103
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>bmo-miR-929-3p MIMAT0015289 Bombyx mori miR-929-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>mmu-miR-1941-5p MIMAT0009405 Mus musculus miR-1941-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>tca-miR-929-3p MIMAT0019133 Tribolium castaneum miR-929-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>osa-miR1866-5p MIMAT0007817 Oryza sativa miR1866-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>vvi-miR477a MIMAT0006575 Vitis vinifera miR477a
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mml-miR-518c-5p MIMAT0026894 Macaca mulatta miR-518c-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>mml-miR-365-2-5p MIMAT0031081 Macaca mulatta miR-365-2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>mml-miR-365-1-5p MIMAT0026856 Macaca mulatta miR-365-1-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>gga-miR-1778 MIMAT0007689 Gallus gallus miR-1778
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>pta-miR482d MIMAT0006015 Pinus taeda miR482d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>oan-miR-1413-5p MIMAT0026761 Ornithorhynchus anatinus
miR-1413-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>oan-miR-802-3p MIMAT0007182 Ornithorhynchus anatinus miR-802-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>oan-miR-1381-5p MIMAT0007120 Ornithorhynchus anatinus
miR-1381-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>oan-miR-1375-3p MIMAT0007065 Ornithorhynchus anatinus
miR-1375-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>hsa-miR-1249-5p MIMAT0032029 Homo sapiens miR-1249-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>ppt-miR477b MIMAT0005375 Physcomitrella patens miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>hiv1-miR-H1 MIMAT0004480 Human immunodeficiency miR-H1
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 8 ctccct 3
>ppt-miR1062 MIMAT0005181 Physcomitrella patens miR1062
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>ppt-miR477e MIMAT0005052 Physcomitrella patens miR477e
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>ppt-miR477d MIMAT0005051 Physcomitrella patens miR477d
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>dme-miR-929-3p MIMAT0005511 Drosophila melanogaster miR-929-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 1 ctccct 6
>ppt-miR477g-5p MIMAT0004362 Physcomitrella patens miR477g-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>ppt-miR477f MIMAT0004361 Physcomitrella patens miR477f
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 1 tccctc 6
>ppt-miR477a-5p MIMAT0004360 Physcomitrella patens miR477a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>ppt-miR477c MIMAT0004359 Physcomitrella patens miR477c
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>mmu-miR-504-3p MIMAT0017277 Mus musculus miR-504-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>mdo-miR-365-5p MIMAT0026683 Monodelphis domestica miR-365-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>ppt-miR1211-5p MIMAT0003900 Physcomitrella patens miR1211-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
>mmu-miR-1249-5p MIMAT0014804 Mus musculus miR-1249-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 8 tccctc 3
>gga-miR-365-2-5p MIMAT0031075 Gallus gallus miR-365-2-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>gga-miR-365-1-5p MIMAT0026630 Gallus gallus miR-365-1-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>ptc-miR477b MIMAT0002075 Populus trichocarpa miR477b
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>ptc-miR477a-5p MIMAT0002074 Populus trichocarpa miR477a-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 ctccct 6
||||||
Sbjct: 3 ctccct 8
>rno-miR-365-5p MIMAT0017184 Rattus norvegicus miR-365-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 tccctc 7
||||||
Sbjct: 6 tccctc 1
>rno-miR-347 MIMAT0000598 Rattus norvegicus miR-347
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 tccctc 7
||||||
Sbjct: 3 tccctc 8
>hsa-miR-149-3p MIMAT0004609 Homo sapiens miR-149-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 ctccct 6
||||||
Sbjct: 6 ctccct 1
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 222
Number of extensions: 187
Number of successful extensions: 157
Number of sequences better than 100.0: 157
Number of HSP's gapped: 157
Number of HSP's successfully gapped: 157
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
