BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= hvt-miR-h14*
(7 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
oha-miR-222b-3p MIMAT0036851 Ophiophagus hannah miR-222b-3p 14 20
oha-miR-222a-3p MIMAT0036849 Ophiophagus hannah miR-222a-3p 14 20
oha-miR-221-3p MIMAT0036847 Ophiophagus hannah miR-221-3p 14 20
tch-miR-222-3p MIMAT0036600 Tupaia chinensis miR-222-3p 14 20
tch-miR-221-3p MIMAT0036523 Tupaia chinensis miR-221-3p 14 20
chi-miR-222-3p MIMAT0036070 Capra hircus miR-222-3p 14 20
chi-miR-221-3p MIMAT0036069 Capra hircus miR-221-3p 14 20
pxy-miR-8544-3p MIMAT0033812 Plutella xylostella miR-8544-3p 14 20
ssa-miR-222b-3p MIMAT0032543 Salmo salar miR-222b-3p 14 20
ssa-miR-222a-3p MIMAT0032541 Salmo salar miR-222a-3p 14 20
ssa-miR-221-5p MIMAT0032539 Salmo salar miR-221-5p 14 20
oar-miR-221 MIMAT0030047 Ovis aries miR-221 14 20
ipu-miR-221 MIMAT0029476 Ictalurus punctatus miR-221 14 20
ccr-miR-222 MIMAT0026274 Cyprinus carpio miR-222 14 20
ccr-miR-221 MIMAT0026273 Cyprinus carpio miR-221 14 20
gga-miR-222b-3p MIMAT0025618 Gallus gallus miR-222b-3p 14 20
pol-miR-221-3p MIMAT0025449 Paralichthys olivaceus miR-221-3p 14 20
ggo-miR-222 MIMAT0024092 Gorilla gorilla miR-222 14 20
ptr-miR-222 MIMAT0024026 Pan troglodytes miR-222 14 20
cgr-miR-222-3p MIMAT0023861 Cricetulus griseus miR-222-3p 14 20
cgr-miR-221-3p MIMAT0023859 Cricetulus griseus miR-221-3p 14 20
sha-miR-221 MIMAT0022797 Sarcophilus harrisii miR-221 14 20
sha-miR-222 MIMAT0022796 Sarcophilus harrisii miR-222 14 20
ola-miR-222 MIMAT0022531 Oryzias latipes miR-222 14 20
ola-miR-221 MIMAT0022530 Oryzias latipes miR-221 14 20
aca-miR-222a-3p MIMAT0021892 Anolis carolinensis miR-222a-3p 14 20
aca-miR-221-3p MIMAT0021890 Anolis carolinensis miR-221-3p 14 20
pma-miR-222-3p MIMAT0019534 Petromyzon marinus miR-222-3p 14 20
pma-miR-221 MIMAT0019532 Petromyzon marinus miR-221 14 20
cin-miR-4080-5p MIMAT0016649 Ciona intestinalis miR-4080-5p 14 20
ppy-miR-222 MIMAT0015808 Pongo pygmaeus miR-222 14 20
tgu-miR-222-3p MIMAT0014514 Taeniopygia guttata miR-222-3p 14 20
tgu-miR-221-3p MIMAT0014512 Taeniopygia guttata miR-221-3p 14 20
ssc-miR-222 MIMAT0013942 Sus scrofa miR-222 14 20
eca-miR-222 MIMAT0013204 Equus caballus miR-222 14 20
eca-miR-221 MIMAT0013203 Equus caballus miR-221 14 20
hvt-miR-H14-3p MIMAT0012867 Herpesvirus of miR-H14-3p 14 20
dre-miR-222b MIMAT0011303 Danio rerio miR-222b 14 20
cfa-miR-222 MIMAT0009851 Canis familiaris miR-222 14 20
cte-miR-1999 MIMAT0009710 Capitella teleta miR-1999 14 20
mmu-miR-1928 MIMAT0009391 Mus musculus miR-1928 14 20
ptr-miR-221 MIMAT0008076 Pan troglodytes miR-221 14 20
ssc-miR-221-3p MIMAT0007762 Sus scrofa miR-221-3p 14 20
cfa-miR-221 MIMAT0006757 Canis familiaris miR-221 14 20
mml-miR-222-3p MIMAT0006250 Macaca mulatta miR-222-3p 14 20
oan-miR-221-3p MIMAT0007135 Ornithorhynchus anatinus miR-221-3p 14 20
oan-miR-222a-3p MIMAT0007133 Ornithorhynchus anatinus miR-222a-3p 14 20
oan-miR-222b-3p MIMAT0007057 Ornithorhynchus anatinus miR-222b-3p 14 20
mdo-miR-221-3p MIMAT0004160 Monodelphis domestica miR-221-3p 14 20
mdo-miR-222a MIMAT0004159 Monodelphis domestica miR-222a 14 20
xtr-miR-221 MIMAT0003700 Xenopus tropicalis miR-221 14 20
xtr-miR-222 MIMAT0003633 Xenopus tropicalis miR-222 14 20
bta-miR-222 MIMAT0003530 Bos taurus miR-222 14 20
bta-miR-221 MIMAT0003529 Bos taurus miR-221 14 20
tni-miR-221 MIMAT0002907 Tetraodon nigroviridis miR-221 14 20
fru-miR-221 MIMAT0002906 Fugu rubripes miR-221 14 20
tni-miR-222 MIMAT0002905 Tetraodon nigroviridis miR-222 14 20
fru-miR-222 MIMAT0002904 Fugu rubripes miR-222 14 20
age-miR-222 MIMAT0002587 Ateles geoffroyi miR-222 14 20
ppa-miR-221 MIMAT0002586 Pan paniscus miR-221 14 20
ppy-miR-221 MIMAT0002585 Pongo pygmaeus miR-221 14 20
ggo-miR-221 MIMAT0002584 Gorilla gorilla miR-221 14 20
mml-miR-221-3p MIMAT0002583 Macaca mulatta miR-221-3p 14 20
dre-miR-222a-3p MIMAT0001289 Danio rerio miR-222a-3p 14 20
dre-miR-221-3p MIMAT0001288 Danio rerio miR-221-3p 14 20
gga-miR-221-3p MIMAT0001108 Gallus gallus miR-221-3p 14 20
gga-miR-222a MIMAT0001107 Gallus gallus miR-222a 14 20
rno-miR-222-3p MIMAT0000891 Rattus norvegicus miR-222-3p 14 20
rno-miR-221-3p MIMAT0000890 Rattus norvegicus miR-221-3p 14 20
mmu-miR-222-3p MIMAT0000670 Mus musculus miR-222-3p 14 20
mmu-miR-221-3p MIMAT0000669 Mus musculus miR-221-3p 14 20
hsa-miR-222-3p MIMAT0000279 Homo sapiens miR-222-3p 14 20
hsa-miR-221-3p MIMAT0000278 Homo sapiens miR-221-3p 14 20
oha-miR-135-3-3p MIMAT0036707 Ophiophagus hannah miR-135-3-3p 12 80
oha-miR-135-2-3p MIMAT0036706 Ophiophagus hannah miR-135-2-3p 12 80
chi-miR-135b-3p MIMAT0035954 Capra hircus miR-135b-3p 12 80
bra-miR860-5p MIMAT0035860 Brassica rapa miR860-5p 12 80
mmu-miR-3618-3p MIMAT0035717 Mus musculus miR-3618-3p 12 80
gsa-let-7-3p MIMAT0035261 Gyrodactylus salaris let-7-3p 12 80
pxy-miR-2756 MIMAT0033749 Plutella xylostella miR-2756 12 80
ssa-miR-135c-3p MIMAT0032349 Salmo salar miR-135c-3p 12 80
bbe-miR-4865-3p MIMAT0031688 Branchiostoma belcheri miR-4865-3p 12 80
stu-miR399i-5p MIMAT0031260 Solanum tuberosum miR399i-5p 12 80
stu-miR8026 MIMAT0030927 Solanum tuberosum miR8026 12 80
hsa-miR-7852-3p MIMAT0030427 Homo sapiens miR-7852-3p 12 80
gga-miR-7478-3p MIMAT0029111 Gallus gallus miR-7478-3p 12 80
mmu-miR-7065-5p MIMAT0028034 Mus musculus miR-7065-5p 12 80
osa-miR6251 MIMAT0024874 Oryza sativa miR6251 12 80
ggo-miR-508 MIMAT0024285 Gorilla gorilla miR-508 12 80
osa-miR5830 MIMAT0023304 Oryza sativa miR5830 12 80
gma-miR5669 MIMAT0022451 Glycine max miR5669 12 80
aca-miR-5456 MIMAT0022083 Anolis carolinensis miR-5456 12 80
aca-miR-187-5p MIMAT0021815 Anolis carolinensis miR-187-5p 12 80
aca-miR-135-3-3p MIMAT0021753 Anolis carolinensis miR-135-3-3p 12 80
aca-miR-135-2-3p MIMAT0021752 Anolis carolinensis miR-135-2-3p 12 80
ssc-miR-155-3p MIMAT0017953 Sus scrofa miR-155-3p 12 80
cin-miR-4175-3p MIMAT0016784 Ciona intestinalis miR-4175-3p 12 80
cin-miR-4152-5p MIMAT0016756 Ciona intestinalis miR-4152-5p 12 80
rno-miR-3559-3p MIMAT0017828 Rattus norvegicus miR-3559-3p 12 80
hsa-miR-3137 MIMAT0015005 Homo sapiens miR-3137 12 80
tgu-miR-135a-2-3p MIMAT0031089 Taeniopygia guttata miR-135a-2-3p 12 80
tgu-miR-187-5p MIMAT0027004 Taeniopygia guttata miR-187-5p 12 80
rlcv-miR-rL1-26-5p MIMAT0019191 Rhesus lymphocryptovirus miR-rL1... 12 80
mml-miR-135b-3p MIMAT0026820 Macaca mulatta miR-135b-3p 12 80
gga-miR-1692 MIMAT0007584 Gallus gallus miR-1692 12 80
oan-miR-187-5p MIMAT0007266 Ornithorhynchus anatinus miR-187-5p 12 80
oan-miR-135a-3p MIMAT0007193 Ornithorhynchus anatinus miR-135a-3p 12 80
oan-miR-135b-1-3p MIMAT0006871 Ornithorhynchus anatinus miR-135b... 12 80
tae-miR1118 MIMAT0005353 Triticum aestivum miR1118 12 80
rno-miR-380-3p MIMAT0017302 Rattus norvegicus miR-380-3p 12 80
mdo-miR-187-5p MIMAT0026674 Monodelphis domestica miR-187-5p 12 80
mdo-miR-135b-3p MIMAT0026667 Monodelphis domestica miR-135b-3p 12 80
mdo-miR-135a-3p MIMAT0026666 Monodelphis domestica miR-135a-3p 12 80
mml-miR-135a-2-3p MIMAT0026567 Macaca mulatta miR-135a-2-3p 12 80
osa-miR417 MIMAT0001333 Oryza sativa miR417 12 80
gga-miR-135a-3-3p MIMAT0031038 Gallus gallus miR-135a-3-3p 12 80
gga-miR-135a-2-3p MIMAT0026489 Gallus gallus miR-135a-2-3p 12 80
rno-miR-187-5p MIMAT0017144 Rattus norvegicus miR-187-5p 12 80
hsa-miR-135b-3p MIMAT0004698 Homo sapiens miR-135b-3p 12 80
mmu-miR-380-3p MIMAT0000745 Mus musculus miR-380-3p 12 80
mmu-miR-135b-3p MIMAT0017044 Mus musculus miR-135b-3p 12 80
rno-miR-135b-3p MIMAT0017043 Rattus norvegicus miR-135b-3p 12 80
mmu-miR-187-5p MIMAT0016997 Mus musculus miR-187-5p 12 80
>oha-miR-222b-3p MIMAT0036851 Ophiophagus hannah miR-222b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oha-miR-222a-3p MIMAT0036849 Ophiophagus hannah miR-222a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oha-miR-221-3p MIMAT0036847 Ophiophagus hannah miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tch-miR-222-3p MIMAT0036600 Tupaia chinensis miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tch-miR-221-3p MIMAT0036523 Tupaia chinensis miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>chi-miR-222-3p MIMAT0036070 Capra hircus miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>chi-miR-221-3p MIMAT0036069 Capra hircus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>pxy-miR-8544-3p MIMAT0033812 Plutella xylostella miR-8544-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gctacat 7
|||||||
Sbjct: 8 gctacat 2
>ssa-miR-222b-3p MIMAT0032543 Salmo salar miR-222b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ssa-miR-222a-3p MIMAT0032541 Salmo salar miR-222a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ssa-miR-221-5p MIMAT0032539 Salmo salar miR-221-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oar-miR-221 MIMAT0030047 Ovis aries miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ipu-miR-221 MIMAT0029476 Ictalurus punctatus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ccr-miR-222 MIMAT0026274 Cyprinus carpio miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ccr-miR-221 MIMAT0026273 Cyprinus carpio miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>gga-miR-222b-3p MIMAT0025618 Gallus gallus miR-222b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>pol-miR-221-3p MIMAT0025449 Paralichthys olivaceus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ggo-miR-222 MIMAT0024092 Gorilla gorilla miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ptr-miR-222 MIMAT0024026 Pan troglodytes miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cgr-miR-222-3p MIMAT0023861 Cricetulus griseus miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cgr-miR-221-3p MIMAT0023859 Cricetulus griseus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>sha-miR-221 MIMAT0022797 Sarcophilus harrisii miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>sha-miR-222 MIMAT0022796 Sarcophilus harrisii miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ola-miR-222 MIMAT0022531 Oryzias latipes miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ola-miR-221 MIMAT0022530 Oryzias latipes miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>aca-miR-222a-3p MIMAT0021892 Anolis carolinensis miR-222a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>aca-miR-221-3p MIMAT0021890 Anolis carolinensis miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>pma-miR-222-3p MIMAT0019534 Petromyzon marinus miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>pma-miR-221 MIMAT0019532 Petromyzon marinus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cin-miR-4080-5p MIMAT0016649 Ciona intestinalis miR-4080-5p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ppy-miR-222 MIMAT0015808 Pongo pygmaeus miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tgu-miR-222-3p MIMAT0014514 Taeniopygia guttata miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tgu-miR-221-3p MIMAT0014512 Taeniopygia guttata miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ssc-miR-222 MIMAT0013942 Sus scrofa miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>eca-miR-222 MIMAT0013204 Equus caballus miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>eca-miR-221 MIMAT0013203 Equus caballus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>hvt-miR-H14-3p MIMAT0012867 Herpesvirus of miR-H14-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>dre-miR-222b MIMAT0011303 Danio rerio miR-222b
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cfa-miR-222 MIMAT0009851 Canis familiaris miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cte-miR-1999 MIMAT0009710 Capitella teleta miR-1999
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 gctacat 7
|||||||
Sbjct: 8 gctacat 2
>mmu-miR-1928 MIMAT0009391 Mus musculus miR-1928
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ptr-miR-221 MIMAT0008076 Pan troglodytes miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ssc-miR-221-3p MIMAT0007762 Sus scrofa miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>cfa-miR-221 MIMAT0006757 Canis familiaris miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mml-miR-222-3p MIMAT0006250 Macaca mulatta miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oan-miR-221-3p MIMAT0007135 Ornithorhynchus anatinus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oan-miR-222a-3p MIMAT0007133 Ornithorhynchus anatinus
miR-222a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oan-miR-222b-3p MIMAT0007057 Ornithorhynchus anatinus
miR-222b-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mdo-miR-221-3p MIMAT0004160 Monodelphis domestica miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mdo-miR-222a MIMAT0004159 Monodelphis domestica miR-222a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>xtr-miR-221 MIMAT0003700 Xenopus tropicalis miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>xtr-miR-222 MIMAT0003633 Xenopus tropicalis miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>bta-miR-222 MIMAT0003530 Bos taurus miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>bta-miR-221 MIMAT0003529 Bos taurus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tni-miR-221 MIMAT0002907 Tetraodon nigroviridis miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>fru-miR-221 MIMAT0002906 Fugu rubripes miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>tni-miR-222 MIMAT0002905 Tetraodon nigroviridis miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>fru-miR-222 MIMAT0002904 Fugu rubripes miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>age-miR-222 MIMAT0002587 Ateles geoffroyi miR-222
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ppa-miR-221 MIMAT0002586 Pan paniscus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ppy-miR-221 MIMAT0002585 Pongo pygmaeus miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>ggo-miR-221 MIMAT0002584 Gorilla gorilla miR-221
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mml-miR-221-3p MIMAT0002583 Macaca mulatta miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>dre-miR-222a-3p MIMAT0001289 Danio rerio miR-222a-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>dre-miR-221-3p MIMAT0001288 Danio rerio miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>gga-miR-221-3p MIMAT0001108 Gallus gallus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>gga-miR-222a MIMAT0001107 Gallus gallus miR-222a
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>rno-miR-222-3p MIMAT0000891 Rattus norvegicus miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>rno-miR-221-3p MIMAT0000890 Rattus norvegicus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mmu-miR-222-3p MIMAT0000670 Mus musculus miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>mmu-miR-221-3p MIMAT0000669 Mus musculus miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>hsa-miR-222-3p MIMAT0000279 Homo sapiens miR-222-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>hsa-miR-221-3p MIMAT0000278 Homo sapiens miR-221-3p
Length = 8
Score = 14.4 bits (7), Expect = 20
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 gctacat 7
|||||||
Sbjct: 2 gctacat 8
>oha-miR-135-3-3p MIMAT0036707 Ophiophagus hannah miR-135-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>oha-miR-135-2-3p MIMAT0036706 Ophiophagus hannah miR-135-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>chi-miR-135b-3p MIMAT0035954 Capra hircus miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>bra-miR860-5p MIMAT0035860 Brassica rapa miR860-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>mmu-miR-3618-3p MIMAT0035717 Mus musculus miR-3618-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ctacat 7
||||||
Sbjct: 1 ctacat 6
>gsa-let-7-3p MIMAT0035261 Gyrodactylus salaris let-7-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ctacat 7
||||||
Sbjct: 3 ctacat 8
>pxy-miR-2756 MIMAT0033749 Plutella xylostella miR-2756
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 6 gctaca 1
>ssa-miR-135c-3p MIMAT0032349 Salmo salar miR-135c-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>bbe-miR-4865-3p MIMAT0031688 Branchiostoma belcheri miR-4865-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>stu-miR399i-5p MIMAT0031260 Solanum tuberosum miR399i-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 3 gctaca 8
>stu-miR8026 MIMAT0030927 Solanum tuberosum miR8026
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>hsa-miR-7852-3p MIMAT0030427 Homo sapiens miR-7852-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 7 ctacat 2
>gga-miR-7478-3p MIMAT0029111 Gallus gallus miR-7478-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ctacat 7
||||||
Sbjct: 1 ctacat 6
>mmu-miR-7065-5p MIMAT0028034 Mus musculus miR-7065-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>osa-miR6251 MIMAT0024874 Oryza sativa miR6251
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>ggo-miR-508 MIMAT0024285 Gorilla gorilla miR-508
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>osa-miR5830 MIMAT0023304 Oryza sativa miR5830
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>gma-miR5669 MIMAT0022451 Glycine max miR5669
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 8 ctacat 3
>aca-miR-5456 MIMAT0022083 Anolis carolinensis miR-5456
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>aca-miR-187-5p MIMAT0021815 Anolis carolinensis miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 1 gctaca 6
>aca-miR-135-3-3p MIMAT0021753 Anolis carolinensis miR-135-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>aca-miR-135-2-3p MIMAT0021752 Anolis carolinensis miR-135-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>ssc-miR-155-3p MIMAT0017953 Sus scrofa miR-155-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ctacat 7
||||||
Sbjct: 3 ctacat 8
>cin-miR-4175-3p MIMAT0016784 Ciona intestinalis miR-4175-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>cin-miR-4152-5p MIMAT0016756 Ciona intestinalis miR-4152-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 8 ctacat 3
>rno-miR-3559-3p MIMAT0017828 Rattus norvegicus miR-3559-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>hsa-miR-3137 MIMAT0015005 Homo sapiens miR-3137
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 8 gctaca 3
>tgu-miR-135a-2-3p MIMAT0031089 Taeniopygia guttata
miR-135a-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>tgu-miR-187-5p MIMAT0027004 Taeniopygia guttata miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 1 gctaca 6
>rlcv-miR-rL1-26-5p MIMAT0019191 Rhesus lymphocryptovirus
miR-rL1-26-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 1 gctaca 6
>mml-miR-135b-3p MIMAT0026820 Macaca mulatta miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>gga-miR-1692 MIMAT0007584 Gallus gallus miR-1692
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 1 gctaca 6
||||||
Sbjct: 6 gctaca 1
>oan-miR-187-5p MIMAT0007266 Ornithorhynchus anatinus miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 1 gctaca 6
>oan-miR-135a-3p MIMAT0007193 Ornithorhynchus anatinus
miR-135a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>oan-miR-135b-1-3p MIMAT0006871 Ornithorhynchus anatinus
miR-135b-1-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>tae-miR1118 MIMAT0005353 Triticum aestivum miR1118
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 2 ctacat 7
||||||
Sbjct: 3 ctacat 8
>rno-miR-380-3p MIMAT0017302 Rattus norvegicus miR-380-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 7 ctacat 2
>mdo-miR-187-5p MIMAT0026674 Monodelphis domestica miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 3 gctaca 8
>mdo-miR-135b-3p MIMAT0026667 Monodelphis domestica miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>mdo-miR-135a-3p MIMAT0026666 Monodelphis domestica miR-135a-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>mml-miR-135a-2-3p MIMAT0026567 Macaca mulatta miR-135a-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>osa-miR417 MIMAT0001333 Oryza sativa miR417
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 8 ctacat 3
>gga-miR-135a-3-3p MIMAT0031038 Gallus gallus miR-135a-3-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>gga-miR-135a-2-3p MIMAT0026489 Gallus gallus miR-135a-2-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>rno-miR-187-5p MIMAT0017144 Rattus norvegicus miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 3 gctaca 8
>hsa-miR-135b-3p MIMAT0004698 Homo sapiens miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>mmu-miR-380-3p MIMAT0000745 Mus musculus miR-380-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 7 ctacat 2
>mmu-miR-135b-3p MIMAT0017044 Mus musculus miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>rno-miR-135b-3p MIMAT0017043 Rattus norvegicus miR-135b-3p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Minus
Query: 2 ctacat 7
||||||
Sbjct: 6 ctacat 1
>mmu-miR-187-5p MIMAT0016997 Mus musculus miR-187-5p
Length = 8
Score = 12.4 bits (6), Expect = 80
Identities = 6/6 (100%)
Strand = Plus / Plus
Query: 1 gctaca 6
||||||
Sbjct: 3 gctaca 8
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 206
Number of extensions: 133
Number of successful extensions: 123
Number of sequences better than 100.0: 123
Number of HSP's gapped: 123
Number of HSP's successfully gapped: 123
Length of query: 7
Length of database: 286,624
Length adjustment: 4
Effective length of query: 3
Effective length of database: 143,312
Effective search space: 429936
Effective search space used: 429936
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 6 (12.4 bits)
