BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ebv-miR-bart14*
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ebv-miR-BART14-5p MIMAT0003425 Epstein Barr miR-BART14-5p 16 6.9
mmu-miR-7046-5p MIMAT0027996 Mus musculus miR-7046-5p 14 27
hsa-miR-6841-5p MIMAT0027584 Homo sapiens miR-6841-5p 14 27
hsa-miR-6755-5p MIMAT0027410 Homo sapiens miR-6755-5p 14 27
tgu-miR-1759 MIMAT0025405 Taeniopygia guttata miR-1759 14 27
hco-miR-5884 MIMAT0023316 Haemonchus contortus miR-5884 14 27
ath-miR5629 MIMAT0022388 Arabidopsis thaliana miR5629 14 27
pma-miR-4544-5p MIMAT0019573 Petromyzon marinus miR-4544-5p 14 27
ppc-miR-2272 MIMAT0011729 Pristionchus pacificus miR-2272 14 27
ppc-miR-2267 MIMAT0011704 Pristionchus pacificus miR-2267 14 27
gga-miR-1759-5p MIMAT0007666 Gallus gallus miR-1759-5p 14 27
>ebv-miR-BART14-5p MIMAT0003425 Epstein Barr miR-BART14-5p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 taccctac 8
||||||||
Sbjct: 1 taccctac 8
>mmu-miR-7046-5p MIMAT0027996 Mus musculus miR-7046-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 accctac 8
|||||||
Sbjct: 8 accctac 2
>hsa-miR-6841-5p MIMAT0027584 Homo sapiens miR-6841-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tacccta 7
|||||||
Sbjct: 7 tacccta 1
>hsa-miR-6755-5p MIMAT0027410 Homo sapiens miR-6755-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tacccta 7
|||||||
Sbjct: 7 tacccta 1
>tgu-miR-1759 MIMAT0025405 Taeniopygia guttata miR-1759
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tacccta 7
|||||||
Sbjct: 7 tacccta 1
>hco-miR-5884 MIMAT0023316 Haemonchus contortus miR-5884
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Mi