BLAST Search Results
BLASTN 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ebv-miR-bart14*
         (8 letters)

Database: /home/users/abid/BLAST/MIRBASE 
           35,828 sequences; 286,624 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ebv-miR-BART14-5p MIMAT0003425 Epstein Barr miR-BART14-5p              16   6.9  
mmu-miR-7046-5p MIMAT0027996 Mus musculus miR-7046-5p                  14      27
hsa-miR-6841-5p MIMAT0027584 Homo sapiens miR-6841-5p                  14      27
hsa-miR-6755-5p MIMAT0027410 Homo sapiens miR-6755-5p                  14      27
tgu-miR-1759 MIMAT0025405 Taeniopygia guttata miR-1759                 14      27
hco-miR-5884 MIMAT0023316 Haemonchus contortus miR-5884                14      27
ath-miR5629 MIMAT0022388 Arabidopsis thaliana miR5629                  14      27
pma-miR-4544-5p MIMAT0019573 Petromyzon marinus miR-4544-5p            14      27
ppc-miR-2272 MIMAT0011729 Pristionchus pacificus miR-2272              14      27
ppc-miR-2267 MIMAT0011704 Pristionchus pacificus miR-2267              14      27
gga-miR-1759-5p MIMAT0007666 Gallus gallus miR-1759-5p                 14      27
>ebv-miR-BART14-5p MIMAT0003425 Epstein Barr miR-BART14-5p
          Length = 8

 Score = 16.4 bits (8), Expect = 6.9
 Identities = 8/8 (100%)
 Strand = Plus / Plus

                 
Query: 1 taccctac 8
         ||||||||
Sbjct: 1 taccctac 8
>mmu-miR-7046-5p MIMAT0027996 Mus musculus miR-7046-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 2 accctac 8
         |||||||
Sbjct: 8 accctac 2
>hsa-miR-6841-5p MIMAT0027584 Homo sapiens miR-6841-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tacccta 7
         |||||||
Sbjct: 7 tacccta 1
>hsa-miR-6755-5p MIMAT0027410 Homo sapiens miR-6755-5p
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tacccta 7
         |||||||
Sbjct: 7 tacccta 1
>tgu-miR-1759 MIMAT0025405 Taeniopygia guttata miR-1759
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Minus

                
Query: 1 tacccta 7
         |||||||
Sbjct: 7 tacccta 1
>hco-miR-5884 MIMAT0023316 Haemonchus contortus miR-5884
          Length = 8

 Score = 14.4 bits (7), Expect =    27
 Identities = 7/7 (100%)
 Strand = Plus / Mi