BLASTN 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ebv-miR-bart9*
(8 letters)
Database: /home/users/abid/BLAST/MIRBASE
35,828 sequences; 286,624 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
bol-miR9411 MIMAT0035366 Brassica oleracea miR9411 16 6.9
ebv-miR-BART9-5p MIMAT0004816 Epstein Barr miR-BART9-5p 16 6.9
ssc-miR-378b-3p MIMAT0037082 Sus scrofa miR-378b-3p 14 27
oha-miR-145-5p MIMAT0036727 Ophiophagus hannah miR-145-5p 14 27
tch-miR-378a-3p MIMAT0036533 Tupaia chinensis miR-378a-3p 14 27
chi-miR-378-3p MIMAT0036194 Capra hircus miR-378-3p 14 27
chi-miR-145-5p MIMAT0035967 Capra hircus miR-145-5p 14 27
efu-miR-145 MIMAT0035122 Eptesicus fuscus miR-145 14 27
efu-miR-378 MIMAT0034813 Eptesicus fuscus miR-378 14 27
ppc-miR-8300-5p MIMAT0033117 Pristionchus pacificus miR-8300-5p 14 27
ppc-miR-8271-3p MIMAT0033036 Pristionchus pacificus miR-8271-3p 14 27
ssa-miR-16a-2-3p MIMAT0032407 Salmo salar miR-16a-2-3p 14 27
ssa-miR-145-5p MIMAT0032369 Salmo salar miR-145-5p 14 27
ipu-miR-145 MIMAT0029422 Ictalurus punctatus miR-145 14 27
bta-miR-378c MIMAT0025551 Bos taurus miR-378c 14 27
mmu-miR-378c MIMAT0025138 Mus musculus miR-378c 14 27
mmu-miR-145b MIMAT0025105 Mus musculus miR-145b 14 27
ppy-miR-378e MIMAT0024409 Pongo pygmaeus miR-378e 14 27
ppy-miR-378b MIMAT0024364 Pongo pygmaeus miR-378b 14 27
ppy-miR-378d MIMAT0024360 Pongo pygmaeus miR-378d 14 27
mml-miR-378d MIMAT0024313 Macaca mulatta miR-378d 14 27
ggo-miR-378e MIMAT0024303 Gorilla gorilla miR-378e 14 27
ggo-miR-378b MIMAT0024242 Gorilla gorilla miR-378b 14 27
ggo-miR-378a MIMAT0024103 Gorilla gorilla miR-378a 14 27
ptr-miR-378e MIMAT0024067 Pan troglodytes miR-378e 14 27
ptr-miR-378b MIMAT0024044 Pan troglodytes miR-378b 14 27
cgr-miR-378-3p MIMAT0023944 Cricetulus griseus miR-378-3p 14 27
aca-miR-16b-3p MIMAT0021802 Anolis carolinensis miR-16b-3p 14 27
aca-miR-145-5p MIMAT0021773 Anolis carolinensis miR-145-5p 14 27
mmu-miR-5124a MIMAT0020634 Mus musculus miR-5124a 14 27
hsa-miR-4712-5p MIMAT0019818 Homo sapiens miR-4712-5p 14 27
pma-miR-145-5p MIMAT0019476 Petromyzon marinus miR-145-5p 14 27
pma-miR-16-3p MIMAT0019382 Petromyzon marinus miR-16-3p 14 27
hsa-miR-378i MIMAT0019074 Homo sapiens miR-378i 14 27
hsa-miR-378h MIMAT0018984 Homo sapiens miR-378h 14 27
hsa-miR-378f MIMAT0018932 Homo sapiens miR-378f 14 27
hsa-miR-378e MIMAT0018927 Homo sapiens miR-378e 14 27
hsa-miR-3654 MIMAT0018074 Homo sapiens miR-3654 14 27
cre-miR1161b MIMAT0018505 Chlamydomonas reinhardtii miR1161b 14 27
hsa-miR-378c MIMAT0016847 Homo sapiens miR-378c 14 27
ppy-miR-770-5p MIMAT0016109 Pongo pygmaeus miR-770-5p 14 27
ppy-miR-422a MIMAT0015881 Pongo pygmaeus miR-422a 14 27
ppy-miR-378a MIMAT0015868 Pongo pygmaeus miR-378a 14 27
hsa-miR-378b MIMAT0014999 Homo sapiens miR-378b 14 27
api-miR-3015a MIMAT0014750 Acyrthosiphon pisum miR-3015a 14 27
ssc-miR-378 MIMAT0013868 Sus scrofa miR-378 14 27
eca-miR-378 MIMAT0013068 Equus caballus miR-378 14 27
eca-miR-145 MIMAT0013064 Equus caballus miR-145 14 27
dsi-miR-978a MIMAT0012424 Drosophila simulans miR-978a 14 27
cfa-miR-145 MIMAT0009863 Canis familiaris miR-145 14 27
bta-miR-378 MIMAT0009305 Bos taurus miR-378 14 27
ptr-miR-770 MIMAT0008322 Pan troglodytes miR-770 14 27
ptr-miR-422a MIMAT0008141 Pan troglodytes miR-422a 14 27
ptr-miR-378a MIMAT0008130 Pan troglodytes miR-378a 14 27
bmo-miR-184-3p MIMAT0007902 Bombyx mori miR-184-3p 14 27
cfa-miR-378 MIMAT0006683 Canis familiaris miR-378 14 27
cel-miR-1823-3p MIMAT0006590 Caenorhabditis elegans miR-1823-3p 14 27
mml-miR-770-5p MIMAT0006514 Macaca mulatta miR-770-5p 14 27
mml-miR-422a MIMAT0006320 Macaca mulatta miR-422a 14 27
mml-miR-378a MIMAT0006307 Macaca mulatta miR-378a 14 27
oan-miR-145-5p MIMAT0007141 Ornithorhynchus anatinus miR-145-5p 14 27
cre-miR1161a MIMAT0005413 Chlamydomonas reinhardtii miR1161a 14 27
dme-miR-978-3p MIMAT0005494 Drosophila melanogaster miR-978-3p 14 27
mdo-miR-145-5p MIMAT0004116 Monodelphis domestica miR-145-5p 14 27
hsa-miR-770-5p MIMAT0003948 Homo sapiens miR-770-5p 14 27
xtr-miR-145 MIMAT0003688 Xenopus tropicalis miR-145 14 27
bta-miR-145 MIMAT0003542 Bos taurus miR-145 14 27
hsa-miR-378d MIMAT0018926 Homo sapiens miR-378d 14 27
rno-miR-378a-3p MIMAT0003379 Rattus norvegicus miR-378a-3p 14 27
mne-miR-145 MIMAT0002270 Macaca nemestrina miR-145 14 27
ppy-miR-145 MIMAT0002269 Pongo pygmaeus miR-145 14 27
ggo-miR-145 MIMAT0002268 Gorilla gorilla miR-145 14 27
ptr-miR-145 MIMAT0002267 Pan troglodytes miR-145 14 27
mml-miR-145-5p MIMAT0002266 Macaca mulatta miR-145-5p 14 27
ssc-miR-145-5p MIMAT0002123 Sus scrofa miR-145-5p 14 27
dre-miR-457b-3p MIMAT0032004 Danio rerio miR-457b-3p 14 27
dre-miR-145-5p MIMAT0001842 Danio rerio miR-145-5p 14 27
hsa-miR-422a MIMAT0001339 Homo sapiens miR-422a 14 27
rno-miR-145-5p MIMAT0000851 Rattus norvegicus miR-145-5p 14 27
mmu-miR-378a-3p MIMAT0003151 Mus musculus miR-378a-3p 14 27
hsa-miR-378a-3p MIMAT0000732 Homo sapiens miR-378a-3p 14 27
hsa-miR-145-5p MIMAT0000437 Homo sapiens miR-145-5p 14 27
mmu-miR-145a-5p MIMAT0000157 Mus musculus miR-145a-5p 14 27
>bol-miR9411 MIMAT0035366 Brassica oleracea miR9411
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 tactggac 8
||||||||
Sbjct: 1 tactggac 8
>ebv-miR-BART9-5p MIMAT0004816 Epstein Barr miR-BART9-5p
Length = 8
Score = 16.4 bits (8), Expect = 6.9
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 1 tactggac 8
||||||||
Sbjct: 1 tactggac 8
>ssc-miR-378b-3p MIMAT0037082 Sus scrofa miR-378b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>oha-miR-145-5p MIMAT0036727 Ophiophagus hannah miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>tch-miR-378a-3p MIMAT0036533 Tupaia chinensis miR-378a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>chi-miR-378-3p MIMAT0036194 Capra hircus miR-378-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>chi-miR-145-5p MIMAT0035967 Capra hircus miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>efu-miR-145 MIMAT0035122 Eptesicus fuscus miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>efu-miR-378 MIMAT0034813 Eptesicus fuscus miR-378
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 2 actggac 8
>ppc-miR-8300-5p MIMAT0033117 Pristionchus pacificus miR-8300-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>ppc-miR-8271-3p MIMAT0033036 Pristionchus pacificus miR-8271-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgga 7
|||||||
Sbjct: 1 tactgga 7
>ssa-miR-16a-2-3p MIMAT0032407 Salmo salar miR-16a-2-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>ssa-miR-145-5p MIMAT0032369 Salmo salar miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ipu-miR-145 MIMAT0029422 Ictalurus punctatus miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>bta-miR-378c MIMAT0025551 Bos taurus miR-378c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>mmu-miR-378c MIMAT0025138 Mus musculus miR-378c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>mmu-miR-145b MIMAT0025105 Mus musculus miR-145b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ppy-miR-378e MIMAT0024409 Pongo pygmaeus miR-378e
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ppy-miR-378b MIMAT0024364 Pongo pygmaeus miR-378b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ppy-miR-378d MIMAT0024360 Pongo pygmaeus miR-378d
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>mml-miR-378d MIMAT0024313 Macaca mulatta miR-378d
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ggo-miR-378e MIMAT0024303 Gorilla gorilla miR-378e
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ggo-miR-378b MIMAT0024242 Gorilla gorilla miR-378b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ggo-miR-378a MIMAT0024103 Gorilla gorilla miR-378a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ptr-miR-378e MIMAT0024067 Pan troglodytes miR-378e
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ptr-miR-378b MIMAT0024044 Pan troglodytes miR-378b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>cgr-miR-378-3p MIMAT0023944 Cricetulus griseus miR-378-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>aca-miR-16b-3p MIMAT0021802 Anolis carolinensis miR-16b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>aca-miR-145-5p MIMAT0021773 Anolis carolinensis miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>mmu-miR-5124a MIMAT0020634 Mus musculus miR-5124a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 8 actggac 2
>hsa-miR-4712-5p MIMAT0019818 Homo sapiens miR-4712-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>pma-miR-145-5p MIMAT0019476 Petromyzon marinus miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>pma-miR-16-3p MIMAT0019382 Petromyzon marinus miR-16-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>hsa-miR-378i MIMAT0019074 Homo sapiens miR-378i
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-378h MIMAT0018984 Homo sapiens miR-378h
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-378f MIMAT0018932 Homo sapiens miR-378f
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-378e MIMAT0018927 Homo sapiens miR-378e
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-3654 MIMAT0018074 Homo sapiens miR-3654
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 2 actggac 8
>cre-miR1161b MIMAT0018505 Chlamydomonas reinhardtii miR1161b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgga 7
|||||||
Sbjct: 1 tactgga 7
>hsa-miR-378c MIMAT0016847 Homo sapiens miR-378c
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ppy-miR-770-5p MIMAT0016109 Pongo pygmaeus miR-770-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>ppy-miR-422a MIMAT0015881 Pongo pygmaeus miR-422a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ppy-miR-378a MIMAT0015868 Pongo pygmaeus miR-378a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-378b MIMAT0014999 Homo sapiens miR-378b
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>api-miR-3015a MIMAT0014750 Acyrthosiphon pisum miR-3015a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgga 7
|||||||
Sbjct: 2 tactgga 8
>ssc-miR-378 MIMAT0013868 Sus scrofa miR-378
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>eca-miR-378 MIMAT0013068 Equus caballus miR-378
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>eca-miR-145 MIMAT0013064 Equus caballus miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>dsi-miR-978a MIMAT0012424 Drosophila simulans miR-978a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 8 actggac 2
>cfa-miR-145 MIMAT0009863 Canis familiaris miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>bta-miR-378 MIMAT0009305 Bos taurus miR-378
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ptr-miR-770 MIMAT0008322 Pan troglodytes miR-770
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>ptr-miR-422a MIMAT0008141 Pan troglodytes miR-422a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>ptr-miR-378a MIMAT0008130 Pan troglodytes miR-378a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>bmo-miR-184-3p MIMAT0007902 Bombyx mori miR-184-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>cfa-miR-378 MIMAT0006683 Canis familiaris miR-378
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>cel-miR-1823-3p MIMAT0006590 Caenorhabditis elegans miR-1823-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgga 7
|||||||
Sbjct: 1 tactgga 7
>mml-miR-770-5p MIMAT0006514 Macaca mulatta miR-770-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>mml-miR-422a MIMAT0006320 Macaca mulatta miR-422a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>mml-miR-378a MIMAT0006307 Macaca mulatta miR-378a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>oan-miR-145-5p MIMAT0007141 Ornithorhynchus anatinus miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>cre-miR1161a MIMAT0005413 Chlamydomonas reinhardtii miR1161a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 1 tactgga 7
|||||||
Sbjct: 1 tactgga 7
>dme-miR-978-3p MIMAT0005494 Drosophila melanogaster miR-978-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 8 actggac 2
>mdo-miR-145-5p MIMAT0004116 Monodelphis domestica miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>hsa-miR-770-5p MIMAT0003948 Homo sapiens miR-770-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>xtr-miR-145 MIMAT0003688 Xenopus tropicalis miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>bta-miR-145 MIMAT0003542 Bos taurus miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>hsa-miR-378d MIMAT0018926 Homo sapiens miR-378d
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>rno-miR-378a-3p MIMAT0003379 Rattus norvegicus miR-378a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>mne-miR-145 MIMAT0002270 Macaca nemestrina miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ppy-miR-145 MIMAT0002269 Pongo pygmaeus miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ggo-miR-145 MIMAT0002268 Gorilla gorilla miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ptr-miR-145 MIMAT0002267 Pan troglodytes miR-145
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>mml-miR-145-5p MIMAT0002266 Macaca mulatta miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>ssc-miR-145-5p MIMAT0002123 Sus scrofa miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>dre-miR-457b-3p MIMAT0032004 Danio rerio miR-457b-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 1 tactgga 7
|||||||
Sbjct: 7 tactgga 1
>dre-miR-145-5p MIMAT0001842 Danio rerio miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>hsa-miR-422a MIMAT0001339 Homo sapiens miR-422a
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>rno-miR-145-5p MIMAT0000851 Rattus norvegicus miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>mmu-miR-378a-3p MIMAT0003151 Mus musculus miR-378a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-378a-3p MIMAT0000732 Homo sapiens miR-378a-3p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2 actggac 8
|||||||
Sbjct: 1 actggac 7
>hsa-miR-145-5p MIMAT0000437 Homo sapiens miR-145-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
>mmu-miR-145a-5p MIMAT0000157 Mus musculus miR-145a-5p
Length = 8
Score = 14.4 bits (7), Expect = 27
Identities = 7/7 (100%)
Strand = Plus / Minus
Query: 2 actggac 8
|||||||
Sbjct: 7 actggac 1
Database: /home/users/abid/BLAST/MIRBASE
Posted date: Sep 2, 2014 3:58 PM
Number of letters in database: 286,624
Number of sequences in database: 35,828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 35828
Number of Hits to DB: 302
Number of extensions: 217
Number of successful extensions: 183
Number of sequences better than 100.0: 83
Number of HSP's gapped: 183
Number of HSP's successfully gapped: 83
Length of query: 8
Length of database: 286,624
Length adjustment: 4
Effective length of query: 4
Effective length of database: 143,312
Effective search space: 573248
Effective search space used: 573248
X1: 5 ( 9.9 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 5 (10.4 bits)
S2: 7 (14.4 bits)
