| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | aagaagag | 8 | ||
| VMR_1306 | wssv-miR9 | 1 | ........ | 8 | 100 |
| VMR_1233 | tumv-miR-s51 | 1 | ........ | 8 | 100 |
| VMR_1290 | wssv-miR214 | 1 | ......._ | 7 | 87 |
| VMR_1289 | wssv-miR212 | 7 | ......._ | 1 | 87 |
| VMR_1280 | wssv-miR162 | 1 | ......._ | 7 | 87 |
| VMR_1174 | sgiv-miR-4 | 1 | __...... | 6 | 75 |
| VMR_0422 | mcmv-miR-m01-2 | 1 | __...... | 6 | 75 |
| VMR_0383 | iltv-miR-i5 | 3 | ......__ | 8 | 75 |
