| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | acacccc | 7 | ||
| VMR_1285 | wssv-miR197 | 2 | ....... | 8 | 100 |
| VMR_0291 | hsv1-miR-h1* | 2 | ....... | 8 | 100 |
| VMR_0906 | rcmv-miR-r111.2-3 | 3 | ......_ | 8 | 85 |
| VMR_0584 | ohv2-miR-6 | 8 | _...... | 3 | 85 |
