| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | accggct | 7 | ||
| VMR_1052 | rlcv-miR-rl1-35-5p | 2 | ....... | 8 | 100 |
| VMR_1051 | rlcv-miR-rl1-35-5p | 2 | ....... | 8 | 100 |
| VMR_1050 | rlcv-miR-rl1-35-5p | 2 | ....... | 8 | 100 |
| VMR_0103 | ebv-miR-bart13* | 2 | ....... | 8 | 100 |
| VMR_0689 | prv-miR-3-5p | 7 | _...... | 2 | 85 |
| VMR_0287 | hsv1-miR-59899 | 2 | ......_ | 7 | 85 |
