| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | agaattg | 7 | ||
| VMR_1211 | tumv-miR-s31 | 2 | ....... | 8 | 100 |
| VMR_1011 | rlcv-miR-rl1-2-5p | 7 | ......_ | 2 | 85 |
| VMR_1010 | rlcv-miR-rl1-2-5p | 7 | ......_ | 2 | 85 |
| VMR_0145 | ebv-miR-bhrf1-2-5p* | 7 | ......_ | 2 | 85 |
| VMR_0143 | ebv-miR-bhrf1-2* | 7 | ......_ | 2 | 85 |
