| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | agaggca | 7 | ||
| VMR_1217 | tumv-miR-s37 | 2 | ....... | 8 | 100 |
| VMR_0990 | rlcv-miR-rl1-21-3p | 8 | ......_ | 3 | 85 |
| VMR_0286 | hsv1-miR-56054b | 6 | _...... | 1 | 85 |
| VMR_0230 | hcmv-miR-ul69-5p | 3 | ......_ | 8 | 85 |
| VMR_0092 | dev-miR-d8-5p | 6 | _...... | 1 | 85 |
