| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | agatgaac | 8 | ||
| VMR_0635 | prv-miR-11-1 | 1 | ........ | 8 | 100 |
| VMR_0626 | prv-miR-11-1 | 1 | ........ | 8 | 100 |
| VMR_0982 | rlcv-miR-rl1-18-5p | 2 | ......__ | 7 | 75 |
| VMR_0981 | rlcv-miR-rl1-18-5p | 2 | ......__ | 7 | 75 |
| VMR_0980 | rlcv-miR-rl1-18-5p | 2 | ......__ | 7 | 75 |
| VMR_0715 | prv-miR-5-3p | 7 | _......_ | 2 | 75 |
| VMR_0352 | hvt-miR-h11 | 3 | _......_ | 8 | 75 |
| VMR_0087 | dev-miR-d5-5p | 8 | ......__ | 3 | 75 |
| VMR_0076 | dev-miR-d19-5p | 1 | _......_ | 6 | 75 |
