| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | agtgacg | 7 | ||
| VMR_0222 | hcmv-miR-ul112-1 | 2 | ....... | 8 | 100 |
| VMR_0221 | hcmv-miR-ul112 | 2 | ....... | 8 | 100 |
| VMR_1207 | tumv-miR-s28 | 3 | _...... | 8 | 85 |
| VMR_0429 | mcmv-miR-m107-1-5p | 8 | ......_ | 3 | 85 |
