| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | atgagtgg | 8 | ||
| VMR_0739 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0732 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0728 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0724 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0721 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0719 | prv-miR-5-5p | 1 | ........ | 8 | 100 |
| VMR_0740 | prv-miR-5-5p | 1 | _....... | 7 | 87 |
| VMR_0733 | prv-miR-5-5p | 1 | _....... | 7 | 87 |
| VMR_0731 | prv-miR-5-5p | 2 | ......._ | 8 | 87 |
| VMR_0729 | prv-miR-5-5p | 1 | _....... | 7 | 87 |
| VMR_0725 | prv-miR-5-5p | 1 | _....... | 7 | 87 |
| VMR_0720 | prv-miR-5-5p | 1 | _....... | 7 | 87 |
| VMR_0714 | prv-miR-5 | 1 | _....... | 7 | 87 |
| VMR_0734 | prv-miR-5-5p | 1 | __...... | 6 | 75 |
| VMR_0726 | prv-miR-5-5p | 1 | __...... | 6 | 75 |
| VMR_0644 | prv-miR-11-1 | 3 | __...... | 8 | 75 |
| VMR_0551 | mghv-miR-m1-8 | 8 | _......_ | 3 | 75 |
