| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | attcgct | 7 | ||
| VMR_0681 | prv-miR-2-5p | 2 | ....... | 8 | 100 |
| VMR_0675 | prv-miR-2-5p | 2 | ....... | 8 | 100 |
| VMR_0542 | mghv-miR-m1-3* | 6 | _...... | 1 | 85 |
| VMR_0324 | hsv2-miR-h19 | 1 | _...... | 6 | 85 |
