| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | caaaagg | 7 | ||
| VMR_0063 | dev-miR-d11-3p | 2 | ....... | 8 | 100 |
| VMR_0690 | prv-miR-4-3p | 1 | _...... | 6 | 85 |
| VMR_0575 | ohv2-miR-17-5 | 6 | _...... | 1 | 85 |
