Result for your query miRNA sequence
>hpv16-miR-h3
caacugau
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap 


Acc numbermiRNAStartAlignmentEnd% Identity
Query1caactgat8
VMR_0264  hpv16-miR-h3 1........8100
VMR_0378  iltv-miR-i1 3__......875