Result for your query miRNA sequence
>bhv1-miR-b3
cacggcg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cacggcg7
VMR_0024 bhv1-miR-b3 2.......8100
VMR_1105 rrv-miR-rr1-2 3_......885
VMR_0329 hsv2-miR-h23 8......_385