Result for your query miRNA sequence
>hcmv-miR-us33-3p
cacgguc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cacggtc7
VMR_0241 hcmv-miR-us33-3p 2.......8100
VMR_0948 rhcmv-miR-rh183-2 2_......785
VMR_0347 hvsa-miR-hsur4-5p 6......_185
VMR_0239 hcmv-miR-us29-3p6 3......_885