Result for your query miRNA sequence
>hsv1-miR-h6
cacuuccc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cacttccc8
VMR_0313 hsv1-miR-h6-3p 1........8100
VMR_0312 hsv1-miR-h6 1........8100
VMR_0527 mghv-miR-m1-1* 8......._287
VMR_1275 wssv-miR144 8......t.187
VMR_0755 prv-miR-7-3p 3......__875
VMR_0535 mghv-miR-m1-13-5p 7__......275