Result for your query miRNA sequence
>rlcv-miR-rl1-29-5p
caguccc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1cagtccc7
VMR_1023 rlcv-miR-rl1-29-5p 2.......8100
VMR_1022 rlcv-miR-rl1-29-5p 2.......8100
VMR_0462 mdv1-miR-m2-3p 7......_285
VMR_0305 hsv1-miR-h3 8_......385
VMR_0093 dev-miR-d9-3p 1......_685