Result for your query miRNA sequence
>rlcv-miR-rl1-16-3p
caugaaac

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1catgaaac8
VMR_0974 rlcv-miR-rl1-16-3p 1........8100
VMR_1221 tumv-miR-s40 2......__775
VMR_0547 mghv-miR-m1-6 1__......675
VMR_0467 mdv1-miR-m3-5p 1_......_675
VMR_0464 mdv1-miR-m3 1_......_675
VMR_0361 hvt-miR-h16-5p 6......__175
VMR_0234 hcmv-miR-us22-5p6 7__......275
VMR_0117 ebv-miR-bart20-3p 1......__675
VMR_0076 dev-miR-d19-5p 2_......_775