| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ccagaaat | 8 | ||
| VMR_1288 | wssv-miR211 | 1 | ........ | 8 | 100 |
| VMR_1195 | tumv-miR-s17 | 6 | __...... | 1 | 75 |
| VMR_0788 | prv-miR-8-3p | 8 | ......__ | 3 | 75 |
| VMR_0526 | mghv-miR-m1-1 | 2 | __...... | 7 | 75 |
| VMR_0430 | mcmv-miR-m108-1 | 6 | _......_ | 1 | 75 |
| VMR_0198 | hbv-miR-b7-5p | 7 | ......__ | 2 | 75 |
| VMR_0197 | hbv-miR-b7-5p | 6 | ......__ | 1 | 75 |
| VMR_0195 | hbv-miR-b7-5p | 7 | ......__ | 2 | 75 |
| VMR_0194 | hbv-miR-b7-5p | 6 | ......__ | 1 | 75 |
| VMR_0193 | hbv-miR-b7-5p | 7 | ......__ | 2 | 75 |
| VMR_0192 | hbv-miR-b7-5p | 6 | ......__ | 1 | 75 |
| VMR_0191 | hbv-miR-b7-5p | 7 | ......__ | 2 | 75 |
| VMR_0190 | hbv-miR-b7-5p | 6 | ......__ | 1 | 75 |
