| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | cccgaaac | 8 | ||
| VMR_0908 | rcmv-miR-r111.2-4 | 1 | ........ | 8 | 100 |
| VMR_0907 | rcmv-miR-r111.2-4 | 1 | ........ | 8 | 100 |
| VMR_0895 | rcmv-miR-r111.1-2 | 2 | __...... | 7 | 75 |
| VMR_0894 | rcmv-miR-r111.1-2 | 2 | __...... | 7 | 75 |
| VMR_0893 | rcmv-miR-r111.1-2 | 2 | __...... | 7 | 75 |
| VMR_0443 | mcmv-miR-m59-2 | 1 | ......__ | 6 | 75 |
